- •
The plasmid introduced into the cyanobacteria was obtained from the ShanghaiTech_China 2022
team. They
constructed a plasmid containing the Sucrose permease (cscB) gene, which can integrate into the
cyanobacterial genome. We expressed this plasmid in S. elongatus. For more information, please
check the
ShanghaiTech_China 2022 website at Engineering Success |
ShanghaiTech_China -
iGEM 2022
Overview
Cycle0: Plasmid Design
Design
Cycle1: Culturing
Design
- •
We decided to cultivate the cyanobacteria using BG11 liquid medium, inoculating the strains at a
ratio of
100:1. The cultures were maintained at room temperature under natural light conditions. The
optical density
at 750 nm (OD750) was measured daily using a spectrophotometer to plot the growth curve.
Build
- Room temperature under natural light
Test
- the cyanobacteria entered the logarithmic phase on day 15 and reached the stationary phase on
day 27.
Learn
Cycle2: Stain Transformation
Design
- •We reviewed literature to obtain the cscB gene sequence
for sucrose secretion and had a plasmid with regulatory elements synthesized.
Build
- •We cultured 1.5 ml of cyanobacteria (OD750 = 0.5),
centrifuged, resuspended in BG11 medium, and added plasmid (≥1 ng/μl). The mixture was incubated
at 30°C for 24 hours.
Test
- •After 24 hours, we spread the culture on BG11 agar plates
with antibiotics and incubated until single colonies appeared, confirming successful
transformation.
Learn
- •We identified transformed colonies using antibiotic
selection, measured sucrose production, and adjusted conditions to optimize cscB expression,
documenting the process throughout.
Cycle3: Expression Validation
Design
- •We selected engineered PCC7942 strains for cscB gene
expression experiments, planned their cultivation in BG11 medium with ampicillin, and prepared
the necessary equipment and reagents, including a sucrose assay kit.
Build
- •Single colonies from antibiotic-resistant plates were
inoculated into BG11 medium with ampicillin and cultured for seven days until OD685 reached 0.5
to ensure sufficient growth and gene expression.
Test
- •50 ml cultures of wild-type and engineered PCC7942 were
centrifuged, resuspended in BG11 medium, and sucrose levels were measured every 24 hours for 72
hours using a sucrose assay kit. Intracellular sucrose was also measured with additional
freeze-thawing, ultrasonication, and extraction steps.
Learn
- •Data was analyzed to evaluate cscB gene expression and
sucrose production. Based on results, adjustments to the expression system or conditions were
made to improve future experiments.
References
- Atsushi Kouzuma, Molecular mechanisms regulating the catabolic and electrochemical activities of Shewanella oneidensis MR-1, Bioscience, Biotechnology, and Biochemistry, Volume 85, Issue 7, July 2021, Pages 1572-1581, https://doi.org/10.1093/bbb/zbab088
- Kasai, T., et al., Overexpression of the adenylate cyclase gene cyaC facilitates current generation by Shewanella oneidensis in bioelectrochemical systems. Bioelectrochemistry, 2019. 129: p. 100-105.
- Sun, W., et al., Promoting Extracellular Electron Transfer of Shewanella oneidensis MR-1 by Optimizing the Periplasmic Cytochrome c Network. Front Microbiol, 2021. 12: p. 727709.
- Li, F., Li, YX., Cao, YX. et al. Modular engineering to increase intracellular NAD(H/+) promotes rate of extracellular electron transfer of Shewanella oneidensis. Nat Commun 9, 3637 (2018). https://doi.org/10.1038/s41467-018-05995-8
- Li, F., Li, Y. X., Cao, Y. X., Wang, L., Liu, C. G., Shi, L., & Song, H. (2018). Modular engineering to increase intracellular NAD(H/+) promotes rate of extracellular electron transfer of Shewanella oneidensis. Nature communications, 9(1), 3637. https://doi.org/10.1038/s41467-018-05995-8
- Cao, Y., Song, M., Li, F., Li, C., Lin, X., Chen, Y., Chen, Y., Xu, J., Ding, Q., & Song, H. (2019). A Synthetic Plasmid Toolkit for Shewanella oneidensis MR-1. Frontiers in microbiology, 10, 410. https://doi.org/10.3389/fmicb.2019.00410
- AHUT_China iGEM Team. (2018). Part: BBa_K2547003. Retrieved from https://parts.igem.org/Part:BBa_K2547003
- Cao, Y., Song, M., Li, F., Li, C., Lin, X., Chen, Y., Chen, Y., Xu, J., Ding, Q., & Song, H. (2019). A synthetic plasmid toolkit for Shewanella oneidensis MR-1. Frontiers in Microbiology, 10, 410. https://doi.org/10.3389/fmicb.2019.00410
- Delgado, V. P., Paquete, C. M., Sturm, G., & Gescher, J. (2019). Improvement of the electron transfer rate in Shewanella oneidensis MR-1 using a tailored periplasmic protein composition. Bioelectrochemistry (Amsterdam, Netherlands), 129, 18-25. https://doi.org/10.1016/j.bioelechem.2019.04.022
- Li, F., Li, Y. X., Cao, Y. X., Wang, L., Liu, C. G., Shi, L., & Song, H. (2018). Modular engineering to increase intracellular NAD(H/+) promotes rate of extracellular electron transfer of Shewanella oneidensis. Nature Communications, 9(1), 3637. https://doi.org/10.1038/s41467-018-05995-8
- iGEM06_MIT. (2008). Part: BBa_B0029. Retrieved from https://parts.igem.org/Part:BBa_B0029
- iGEM22_ShanghaiTech_China. (2022). Part: BBa_K4115045. Retrieved from https://parts.igem.org/Part:BBa_K4115045
- SCUT-China iGEM Team. (2023). Part: BBa_K4621004. Retrieved from https://parts.igem.org/Part:BBa_K4621004
- Watanabe, T., Suzuki, K., Oyanagi, W., Ohnishi, K., & Tanaka, H. (1990). Gene cloning of chitinase A1 from Bacillus circulans WL-12 revealed its evolutionary relationship to Serratia chitinase and to the type III homology units of fibronectin. Journal of Bacteriology, 172(1), 401-409. https://doi.org/10.1128/jb.172.1.401-409.1990
- Weiss, R. (n.d.). Part: BBa_B0030. Retrieved from https://parts.igem.org/Part:BBa_B0030