| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_010473 | 4,296,510 | 671 bp→GAGCGGCCGCCACCGCGGGAAGTTCCTATACTTTCTAGAGAATAGGAACCTTCGCATGCACGCAGCATATGC | coding (2‑672/672 nt) | nfi → | deoxyribonuclease V |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_010473 | 4296510 | 4297180 | 671 | 38 [0] | [0] 38 | nfi | deoxyribonuclease V |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_010473 | = 4296509 | 0 (0.000) | 27 (1.100) +GAGCGGCCGCCACCGCGGGAAGTTCCTATACTTTCTAGAGAATAGGAACCTTCGCATGCACGCAGCATATGC |
26/254 | 0.1 | 100% | coding (1/672 nt) | nfi | deoxyribonuclease V |
| ? | NC_010473 | 4297181 = | 0 (0.000) | intergenic (+1/‑42) | nfi/yjaG | deoxyribonuclease V/YjaG family protein | |||||
CTGGCCTGGGTCTGGCGCAGCAAAGCGCGCTGTAACCCGTTGTTTATCGCTACCGGCCATCGGGTCAGCGTGGACAGCGCGCTGGCGTGGGTACAACGCTGCATGAAAGGCTATCGTCTGCCGGAGCCAACGCGCTGGGCGGACGCGGTGGCCTCGGAACGTCCGGCGTTCGTGCGCTATACAGCAAATCAGCCCTAATTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTATTT‑GAGAACT‑CAACATGTTACAAAACCCAATTCATCTGCGTCTGGAGCGCCTGGAAAGCTGGCAGCATGTCACTTTCATGGCTTGCTTATG‑CGAACGCATGTACCCCAATTACGCCATGTTCTGCCAGCAAACCGGTTTTGGTGATGGGCAAATTTACCGTCGCA > NC_010473/4296983‑4297373 | acggcgaaggtcatgtctttaaccttggtcacggcattcatcaggatgtgccgccagaacatgctggcgtgttcgtggaggcagtgcatcgactgtctgaacagtatcaccgctaaggagtgattagagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgctt < 1:14614S4‑M2/2‑1 (MQ=255) ggcgaaggtcatgtctttaaccttggtcacggcattcatcaggatgtgccgccagaacatgctggcgtgttcgtggaggcagtgcatcgactgtctgaacagtatcaccgctaaggagtgattagagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcTTCa > 1:2590S55‑M2/197‑200 (MQ=255) ggcgaaggtcatgtctttaaccttggtcacggcattcatcaggatgtgccgccagaacatgctggcgttcgtggaggcagtgcatcgactgtctgaacagtatcaccgctaaggagtgattagagcggccgccaccgcgggaagttcctatactttctagagaatagggaaccttcgcatgcacgcagcatatgcTTCA‑g < 1:18753S1‑M2/5‑1 (MQ=255) aggtcatgtctttaaccttggtcacggcattcatcaggatgtgccgccagaacatgctggcgtgttcgtggaggcagtgcatcgactgtctgaacagtatcaccgctaaggagtgattagagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcTTCA‑GGTaa < 1:15710S7‑M2/9‑1 (MQ=255) gtctttaaccttggtcacggcattcatcaggatgtgccgccagaacatgctggcgtgttcgtggaggcagtgcatcgactgtctgaacagtatcaccgctaaggagtgattagagcggccgccaccgcgggaagttcctatactttctagaaataggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGa < 1:2793S16‑M2/17‑1 (MQ=255) ctttaaccttggtcacggcattcatcaggatgtgccgccagaacatgctggcgtgttcgtggaggcagtgcatcgactgtctgaacagtatcaccgctaaggagtgattagagcggccgccaccgcgggaattttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGa > 1:29883S26‑M2/184‑200 (MQ=255) aaccttggtcacggcattcatcaggatgtgccgccagaacatgctggcgtgttcgtggaggcagtgcatcgactgtctgaacagtatcaccgctaaggagtgattagagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGA‑‑‑‑GGATAAtt > 1:26951S29‑M2/179‑200 (MQ=255) accttggtcacggcattcatcaggatgtgccgccagaacatgctggcgtgttcgtggaggcagtgcatcgactgtctgaacagtatcaccgctaaggagtgattagagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAAttt > 1:4193S46‑M2/178‑200 (MQ=255) tcacggcattcatcaggatgtgccgccagaacatgctggcgtgttcgtggaggcagtgcatcgactgtctgaacagtatcaccgctaaggagtgattagagcggccgccaccgcgggaagttcctatacttttctagagaataggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTAt > 1:31892S58‑M2/172‑200 (MQ=255) acggcattcatcaggatgtgccgccagaacatgctggcgtgttcgtggaggcagtgcatcgactgtctgaacagtatcaccgctaaggagtgattagagcggccgccaccgcgggaagttcctatacttttagagaataggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTATTT‑ga > 1:18012S10‑M2/168‑200 (MQ=255) gcattcatcaggatgtgccgccagaacatgctggcgtgttcgtggaggcagtgcatcgactgtctgaacagtatcaccgctaaggagtgattagagcggccgccaccgcgggaagttcctatctttctagagaataggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTATTT‑GAGaa > 1:20808S17‑M2/165‑200 (MQ=255) tcatcaggatgtgccgccagaacatgctggcgtgttcgtggaggcagtgcatcgactgtctgaacagtatcaccgctaaggagtgattagagcggccgccaccgcgggaagttcctatactttctgagaataggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTATTT‑GAGAACT‑Ca > 1:32217S55‑M2/161‑200 (MQ=255) tcaggatgtgccgccagaacatgctggcgtgttcgtggaggcagtgcatcgactgtctgaacagtatcaccgctaaggagtgattagagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTATTT‑GAGAACT‑CAAc < 1:2096S4‑M2/42‑1 (MQ=255) tgtgccgccagaacatgctggcgtgttcgtggaggcagtgcatcgactgtctgaacagtatcaccgctaaggagtgattagagcggccgccaccgcgggaagttcctatactttctagaatagggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTATTT‑GAGAACT‑CAACATGTTAc < 1:30126S70‑M2/49‑1 (MQ=255) tgccgccagaacatgctggcgtgttcgtggaggcagtgcatcgactgtctgaacagtatcaccgctaaggagtgattagagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTATTT‑GAGAACT‑CAACATGTTACa > 1:13063S53‑M2/151‑200 (MQ=255) tgctggcgtgttcgtggaggcagtgcatcgactgtctgaacagtatcaccgctaaggagtgattagagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTATTT‑GA‑AAC‑‑CAACATGTTACAAAACCCAATTCATCt < 1:551S55‑M2/63‑1 (MQ=255) gctggcgtgttcgtggaggcagtgcatcgactgtctgaaacagtatcaccgctaaggagtgattagagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTATTT‑GAGAACT‑‑GACATGTTACAAAACCCAATTCATc < 1:11998S30‑M2/63‑1 (MQ=255) tggcgtgttcgtggaggcagtgcatcgactgtctgaacagtatcaccgctaaggagtgattagagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTATTT‑GAGAACT‑CAACATGTTACAAAACCCAATTCATCTg > 1:30468S105‑M2/135‑200 (MQ=255) cgtggaggcagtgcatcgactgtctgaacagtatcaccgctaaggagtgattcaagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTATTT‑GAGAACT‑CAACATGTTACAAAACCCAATTCATCTGCGTCTGGAg > 1:16858S7‑M2/126‑200 (MQ=255) gttcgtggaggcagtgcatcgactgtctgaacagtatcaccgctaaggagtgattagagcggccgccaccgcgggagttctgactccagagaataggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTATTT‑GAGAACT‑CAACATGTTACAAAACCCAATTCATCTGCGTCTGGAgcg < 1:30468S34‑M2/77‑1 (MQ=255) ggcagtgcatcgactgtctgaacagtatcaccgctaaggagtgattagagcggccgccaccgcgggaagttcctttttatactttctagagaataggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTATTT‑GAGAACT‑CAACATGTTACAAAACCCAATTCATCTGCGTCTGGAgcg > 1:26250S6‑M2/124‑200 (MQ=255) tggaggcagtgcatcgactgtctgaacagtatcaccgctaaggagtgattagagcggccgccaccgcgggaagttcctagtactctcagaataggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTATTT‑GAGAACT‑CAACATGTTACAAAACCCAATTCATCTGCGTCTGGAGCGcc < 1:14569S15‑M2/79‑1 (MQ=255) catcgactgtctgaacagtatcaccgctaaggagtgattagagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTATTT‑GAGAACT‑CAACATGTTACAAAACCCAATTCATCTGCGTCTGGAGCGCCT‑GAAAGCTg < 1:16421S6‑M2/88‑1 (MQ=255) atcgactgtctgaacagtatcaccgctaaggagtgattagagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTATTT‑GAGAACT‑CAACATGTTAGAAAACCCAATTCATCTGCGTCTGGAGCGCCTGGAAAGCTg < 1:22175S25‑M2/89‑1 (MQ=255) tctgaacagtatcaccgctaaggagtgattagagcggccgccaccgcgggaagttcctatactttctagagaataggaagcctcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTATTTAAAAAACTGGAGCATG‑TACCAAACCCAATTCATCTGCGTCTGGAGCGCCTGGaaagctgggccaca > 1:14568S2‑M2/104‑194 (MQ=255) tctgaacagtatcaccgctaaggagtgattagagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTATTT‑GAGAACT‑CAACATGTTACAAAACCCAATTCATCTGCGTCTGGAGCGCCTGG‑‑AGCT‑GCAGCATGTCa < 1:26255S4‑M2/97‑1 (MQ=255) accgctaaggagtgattagagcggccgccaccgcggggagttctgatactttctcagagaataggaaccttcgcatgcacgcagcatatgcTTCAGGGTAAACTGC‑‑‑‑GGATAATTTCCGTATTT‑GAGAACT‑CAACATGTTACAAAACCCAATTCATCTGCGTCTGGAGCGCCTGGAAAGCTGGCAGCATGTCACTTTCATg < 1:1195S32‑M2/109‑1 (MQ=255) agcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTATTT‑GAGAACT‑CAACATGTTACAAAACCCAATTCATCTGCGTCTGGAGCGCCTGGAAAGCTGGCAGCATGTCACTTTCATGGCTTGCTTATG‑CGAACGCATg < 1:4794S40‑M2/129‑1 (MQ=255) ggccgccaccgcgggaagttcctatactttctggatgacggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTATTT‑GAGAACT‑CAACATGTTACAAAACCCAATTCATCTGCGTCTGGAGCGCCTGGAAAGCTGGCAGCATGTCTCGCTGATCGCTTGCTTATG‑CGAACGCATGTAcc > 1:27946S15‑M2/68‑200 (MQ=255) gccaccgccgggaagttcctatactttctgagatacggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTATTT‑GAGAACT‑CAACATGTTACAAAACCCAATTCATCTGCGTCTGGAGCGCCTGGAAAGCTGGCAGCATGTCACTTTCATGGCTTGCTTATG‑CGAACGCATGTACCCCa > 1:22427S95‑M2/65‑200 (MQ=255) gttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGGGATC‑CAGAACT‑‑‑ACATGTTACAAAACCCAATTCATCTGCGTCTGGAGTGCCTGGAAAGCTGGCAGCATGTCACTTTCATGGCTTGCTTATG‑CGAACGCATGTACCCCAATTACGCCATGTTCt < 1:1479S10‑M2/149‑1 (MQ=255) gttcctatactttctcaagaatagggaaggcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTATTT‑GAGAACT‑CAACATGTTACAAAACCCAATTCATCTGCGTCTGGAGCGCCTGGAAAGCTGGCAGCATGTCACTTTCATG‑‑‑‑GCTTATGCCGAACGTATGTACCCCAATTACGCCATGTTCTGc > 1:29000S21‑M2/51‑200 (MQ=255) tctagagaataggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTATTT‑GAGAACT‑CAACATGTTACAAAACCCAATTCATCTGCGTCTGGAGCGCCTGGAAAGCTGGCAGCATGTCACTTTCATGGCTTGCTTATG‑CGAACACATG‑‑‑CCCAATTACGCCATGTTCTGCCAGCAAACCgg > 1:7595S12‑M2/40‑200 (MQ=255) tctagacaataggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGCTGGTGGATAATTTCCGTATTT‑GAGACCC‑TAACATGTTACAAAACCCAATTCATCTGTGTCTGGAGCGCCTGGAAAGCTGGCAGCATGTCACTTTCATGGCTTGCTTATG‑CGAACGCATGTACCCCAATTACGCCATGTTCTGCCAGc < 1:7591S92‑M2/161‑1 (MQ=255) gaataggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTATTT‑GAGAACT‑CAACATGTTACAAAACCCAATTCATCTGCGTCTGGAGCGCCTGGAAAGCTGGCAGCATGTCACTTTCATGGCTTGCTTATG‑CGAACGCATGTACCCCAATTACGCCATGTTCTGCCAGCAAACCGGttt < 1:18514S54‑M2/167‑1 (MQ=255) taggaaccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTATTT‑GAGAACT‑CAACATGTTACAAAACCCAATTCATCTGCGTCTGGAGCGCCTGGAAAGCTGGCAGCATGTCACTTTCATGGCTTGCTTATG‑CGAACGCATGTACCCCAATTACGCCATGTTCTGCCAGCAAACCGGTTTTgg < 1:22336S12‑M2/170‑1 (MQ=255) ccttcgcatgcacgcagcatatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGGA‑TC‑CAGAACT‑CAACATGTTACAAAACCCAATTCATCTGCGTCTGGAGCGCCTGGAAAGCTGGCAGCATGTCACTTTCATGGCTTGCTTATG‑CGAACGCATGTACCCCAATTACGCCATGTTCTGCCAGCAAACCGGTTTTggtgacggc < 1:477S11‑M2/176‑5 (MQ=255) catatgcTTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTATTT‑GAGAACT‑CAACATGTTACAAAACCCAATTCATCTGCGTCTGGAGCGCCTGGAAAGCTGGCAGCATGTCACTTTCATGGCTTGCTTATG‑CGAACGCATGTACCCCAATTACGCCATGTTCTGCCAGCAAACCGGTTTTGGTGATGGGCAAATTTACCGTCGCa < 1:2485S89‑M2/193‑1 (MQ=255) | CTGGCCTGGGTCTGGCGCAGCAAAGCGCGCTGTAACCCGTTGTTTATCGCTACCGGCCATCGGGTCAGCGTGGACAGCGCGCTGGCGTGGGTACAACGCTGCATGAAAGGCTATCGTCTGCCGGAGCCAACGCGCTGGGCGGACGCGGTGGCCTCGGAACGTCCGGCGTTCGTGCGCTATACAGCAAATCAGCCCTAATTCA‑GGTAAACTGC‑‑‑‑GGATAATTTCCGTATTT‑GAGAACT‑CAACATGTTACAAAACCCAATTCATCTGCGTCTGGAGCGCCTGGAAAGCTGGCAGCATGTCACTTTCATGGCTTGCTTATG‑CGAACGCATGTACCCCAATTACGCCATGTTCTGCCAGCAAACCGGTTTTGGTGATGGGCAAATTTACCGTCGCA > NC_010473/4296983‑4297373 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 47 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |