| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_010473 | 4,296,510 | 671 bp→GAGCGGCCGCCACCGCGGGAAGTTCCTATACTTTCTAGAGAATAGGAACCTTCGCATGCACGCAGCATATGC | coding (2‑672/672 nt) | nfi → | deoxyribonuclease V |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_010473 | 4296510 | 4297180 | 671 | 38 [0] | [0] 38 | nfi | deoxyribonuclease V |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_010473 | = 4296509 | 0 (0.000) | 27 (1.100) +GAGCGGCCGCCACCGCGGGAAGTTCCTATACTTTCTAGAGAATAGGAACCTTCGCATGCACGCAGCATATGC |
26/254 | 0.1 | 100% | coding (1/672 nt) | nfi | deoxyribonuclease V |
| ? | NC_010473 | 4297181 = | 0 (0.000) | intergenic (+1/‑42) | nfi/yjaG | deoxyribonuclease V/YjaG family protein | |||||
GGATCCGTCGATGCTGTACGCGCCGCCTGCCCGCATTGAAGAAGAAGTAGCGACTATACTTGCAGGTTTCGGTCACGGCGAAGGTCATGTCTTTAACCTTGGTCACGGCATTCATCAGGATGTGCCGCCAGAACATGCTGGCGTGTTCGTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTATGGATCTCGCGTCATTACGCGCTCAACAAATCGAACTGGCTTCTTCTGTGATCCGCGAGGATCGACTCGATAAAGATCCACCGGATCTGATCGCCGGAGCCGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGAGCGGCGATGGTGCTGCTGAAATATCCCTCGCTTGAGCTGGTCGAG > NC_010473/4296310‑4296691 | ggATCCGTCGATGCTGTACGCGCCGCCTGCCCGCATTGAAGAAGAAGTAGCGACTATACTTGCAGGTTTCGGTCACGGCGAAGGTCATGTCTTTAACCTTGGTCACGGCATTCATCAGGATGTGCCGCCAGAACATGCTGGCGTGTTCGTGGAGGCAGTG‑CAATC‑ACTGT‑TG‑AAAAATATCACCGCTAAGGAGTGATTAg < 1:24681S26‑M1/200‑2 (MQ=255) gATCCGTCGATGCTGTACGCGCCGCCTGCCCGCATTGAAGAAGAAGTAGCGACTATACTTGCAGGTTTCGGTCACGGCGAAGGTCATGTCTTTAACCTTGGTCACGGCATTCATCAGGATGTGCCGCCAGAACATGCTGGCGTGTTCGTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAg < 1:4794S41‑M1/200‑2 (MQ=255) ccGTCGATGCTGTACGCGCCGCCTGCCCGCATTGAAGAAGAAGTAGCGACTATACTTGCAGGTTTCGGTCACGGCGAAGGTCATGTCTTTAACCTTGGTCACGGCATTCATCAGGATGTGCCGCCAGAACATGCTGGCGTGTTCGTGGAGGCGATGCC‑ATCGACTG‑CTG‑AACAGTATCGCCGCTAAGGAGTGATTAgagc > 1:27946S14‑M1/1‑196 (MQ=255) cGATGCTGTACGCGCCGCCTGCCCGCATTGAAGAAGAAGTAGCGACTATACTTGCAGGTTTCGGTCACGGCGAAGGTCATGTCTTTAACCTTGGTCACGGCATTCATCAGGATGTGCCGCCAGAACATGCTGGCGTGTTCGTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggcc > 1:22427S94‑M1/1‑192 (MQ=255) gccgccTGCCCGCATTGAAGAAGAAGTAGCGACTATACTTGCAGGTTTCGGTCACGGCGAAGGTCATGTCTTTAACCTTGGTCACGGCATTCATCAGGATGTGCCGCCAGAACATGCTGGCGTGTTCGTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggaa > 1:29000S20‑M1/1‑179 (MQ=255) ccTGCCCGCATTGAAGAAGAAGTAGCGACTATACTTGCAGGTTTCGGTCACGGCGAAGGTCATGTCTTTAACCTTGGTCACGGCATTCATCAGGATGTGCCGCCAGAACATGCTGGCGTGTTCGTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgaagccgcggccgccaccgcgggaa < 1:1479S11‑M1/200‑26 (MQ=255) ccGCATTGAAGAAGAAGTAGCGACTAT‑GTTGCAGGTTTCGGTCACGGCGAAGGTCATGTCTTTAACCTTGGTCACGGCATTCATCAGGATGTGCCGCCAGAACATGCTGGCGTGTTCGTCGAGGCGCTG‑C‑AT‑GACTGTCTG‑‑ACATTATCACCACTAAGGAGTGATTAgagcggccgccaccgcgggaagttcctatactt > 1:7595S11‑M1/1‑167 (MQ=255) gaagaagaaGTAGCGACTATACTTGCAGGTTTCGGTCACGGCGAAGGTCATGTCTTTAACCTTGGTCACGGCATTCATCAGGATGTGCCGCCAGAACATGCTGGCGTCT‑‑GTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcggggagttctgatacttttgaga < 1:18514S55‑M1/200‑40 (MQ=255) agaagTAGCGACTATACTTGCAGGTTTCGGTCACGGCGAAGGTCATGTCTTTAACCTTGGTCACGGCATTCATCAGGATGTGCCGCCAGAACATGCTGGCGTGTTCGTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggaagttcctatactttctagagaa < 1:22336S13‑M1/200‑43 (MQ=255) aagTAGCGACGATACTTGCAGGTTTCGGTCACGGCGAAGGTCATGTCTTTAACCTTGGTCACGGCATTCATCAGGATGTGCCGCCAGAACATGCTGGCGTGTTCGTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGAT‑agcggccgccaccgcgtagttctgatactttctagagaataggaa < 1:477S12‑M1/200‑46 (MQ=255) cAGGTTTCGGTCACGGCGAAGGTCATGTCTTTAACCTTGGTCACGGCATTCATCAGGATGTGCCGCCAGAACATGCTGGCGTGTTCGTGGAGGCAGTGAC‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggagttcaggttcccagagaataggaaccttcgcatgcacgcag < 1:2485S90‑M1/200‑62 (MQ=255) aCGGCGAAGGTCATGTCTTTAACCTTGGTCACGGCATTCATCAGGATGTGCCGCCAGAACATGCTGGCGTGTTCGTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgctt < 1:14614S4‑M1/200‑75 (MQ=255) ggCGAAGGTCATGTCTTTAACCTTGGTCACGGCATTCATCAGGATGTGCCGCCAGAACATGCTGGCGTGTTCGTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcttca > 1:2590S55‑M1/1‑124 (MQ=255) ggCGAAGGTCATGTCTTTAACCTTGGTCACGGCATTCATCAGGATGTGCCGCCAGAACATGCTGGC‑‑GTTCGTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggaagttcctatactttctagagaatagggaaccttcgcatgcacgcagcatatgcttcag < 1:18753S1‑M1/200‑79 (MQ=255) aGGTCATGTCTTTAACCTTGGTCACGGCATTCATCAGGATGTGCCGCCAGAACATGCTGGCGTGTTCGTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcttcaggtaa < 1:15710S7‑M1/200‑82 (MQ=255) gTCTTTAACCTTGGTCACGGCATTCATCAGGATGTGCCGCCAGAACATGCTGGCGTGTTCGTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggaagttcctatactttctagaaataggaaccttcgcatgcacgcagcatatgcttcaggtaaactgcgga < 1:2793S16‑M1/200‑89 (MQ=255) cTTTAACCTTGGTCACGGCATTCATCAGGATGTGCCGCCAGAACATGCTGGCGTGTTCGTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggaattttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcttcaggtaaactgcgga > 1:29883S26‑M1/1‑110 (MQ=255) aaCCTTGGTCACGGCATTCATCAGGATGTGCCGCCAGAACATGCTGGCGTGTTCGTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcttcaggtaaactgaggataatt > 1:26951S29‑M1/1‑106 (MQ=255) aCCTTGGTCACGGCATTCATCAGGATGTGCCGCCAGAACATGCTGGCGTGTTCGTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcttcaggtaaactgcggataattt > 1:4193S46‑M1/1‑105 (MQ=255) tCACGGCATTCATCAGGATGTGCCGCCAGAACATGCTGGCGTGTTCGTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggaagttcctatacttttctagagaataggaaccttcgcatgcacgcagcatatgcttcaggtaaactgcggataatttccgtat > 1:31892S58‑M1/1‑98 (MQ=255) aCGGCATTCATCAGGATGTGCCGCCAGAACATGCTGGCGTGTTCGTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggaagttcctatacttttagagaataggaaccttcgcatgcacgcagcatatgcttcaggtaaactgcggataatttccgtatttga > 1:18012S10‑M1/1‑96 (MQ=255) gCATTCATCAGGATGTGCCGCCAGAACATGCTGGCGTGTTCGTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggaagttcctatctttctagagaataggaaccttcgcatgcacgcagcatatgcttcaggtaaactgcggataatttccgtatttgagaa > 1:20808S17‑M1/1‑93 (MQ=255) tcatcaGGATGTGCCGCCAGAACATGCTGGCGTGTTCGTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggaagttcctatactttctgagaataggaaccttcgcatgcacgcagcatatgcttcaggtaaactgcggataatttccgtatttgagaactca > 1:32217S55‑M1/1‑89 (MQ=255) tcaGGATGTGCCGCCAGAACATGCTGGCGTGTTCGTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcttcaggtaaactgcggataatttccgtatttgagaactcaac < 1:2096S4‑M1/200‑115 (MQ=255) tgtgCCGCCAGAACATGCTGGCGTGTTCGTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggaagttcctatactttctagaatagggaaccttcgcatgcacgcagcatatgcttcaggtaaactgcggataatttccgtatttgagaactcaacatgttac < 1:30126S70‑M1/200‑121 (MQ=255) tgCCGCCAGAACATGCTGGCGTGTTCGTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcttcaggtaaactgcggataatttccgtatttgagaactcaacatgttaca > 1:13063S53‑M1/1‑78 (MQ=255) tGCTGGCGTGTTCGTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcttcaggtaaactgcggataatttccgtatttgaaaccaacatgttacaaaacccaattcatct < 1:551S55‑M1/200‑136 (MQ=255) gCTGGCGTGTTCGTGGAGGCAGTG‑C‑ATCGACTGTCTGAAACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcttcaggtaaactgcggataatttccgtatttgagaactgacatgttacaaaacccaattcatc < 1:11998S30‑M1/200‑136 (MQ=255) tGGCGTGTTCGTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcttcaggtaaactgcggataatttccgtatttgagaactcaacatgttacaaaacccaattcatctg > 1:30468S105‑M1/1‑62 (MQ=255) gtTCGTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggagttctgactccagagaataggaaccttcgcatgcacgcagcatatgcttcaggtaaactgcggataatttccgtatttgagaactcaacatgttacaaaacccaattcatctgcgtctggagcg < 1:30468S34‑M1/200‑145 (MQ=255) cGTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTCaagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcttcaggtaaactgcggataatttccgtatttgagaactcaacatgttacaaaacccaattcatctgcgtctggag > 1:16858S7‑M1/1‑53 (MQ=255) tGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggaagttcctagtactctcagaataggaaccttcgcatgcacgcagcatatgcttcaggtaaactgcggataatttccgtatttgagaactcaacatgttacaaaacccaattcatctgcgtctggagcgcc < 1:14569S15‑M1/200‑150 (MQ=255) ggCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggaagttcctttttatactttctagagaataggaaccttcgcatgcacgcagcatatgcttcaggtaaactgcggataatttccgtatttgagaactcaacatgttacaaaacccaattcatctgcgtctggagcg > 1:26250S6‑M1/1‑47 (MQ=255) c‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcttcaggtaaactgcggataatttccgtatttgagaactcaacatgttacaaaacccaattcatctgcgtctggagcgcctgaaagctg < 1:16421S6‑M1/200‑161 (MQ=255) aTCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcttcaggtaaactgcggataatttccgtatttgagaactcaacatgttagaaaacccaattcatctgcgtctggagcgcctggaaagctg < 1:22175S25‑M1/200‑162 (MQ=255) tCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggaagttcctatactttctagagaataggaagcctcgcatgcacgcagcatatgcttcaggtaaactgcggataatttccgtatttaaaaaactggagcatgtaccaaacccaattcatctgcgtctggagcgcctggaaagctgggccaca > 1:14568S2‑M1/1‑31 (MQ=255) tCTG‑AACAGTATCACCGCTAAGGAGTGATTAgagcggccgccaccgcgggaagttcctatactttctagagaataggaaccttcgcatgcacgcagcatatgcttcaggtaaactgcggataatttccgtatttgagaactcaacatgttacaaaacccaattcatctgcgtctggagcgcctggagctgcagcatgtca < 1:26255S4‑M1/200‑170 (MQ=255) aCCGCTAAGGAGTGATTAgagcggccgccaccgcggggagttctgatactttctcagagaataggaaccttcgcatgcacgcagcatatgcttcagggtaaactgcggataatttccgtatttgagaactcaacatgttacaaaacccaattcatctgcgtctggagcgcctggaaagctggcagcatgtcactttcatg < 1:1195S32‑M1/200‑183 (MQ=255) | GGATCCGTCGATGCTGTACGCGCCGCCTGCCCGCATTGAAGAAGAAGTAGCGACTATACTTGCAGGTTTCGGTCACGGCGAAGGTCATGTCTTTAACCTTGGTCACGGCATTCATCAGGATGTGCCGCCAGAACATGCTGGCGTGTTCGTGGAGGCAGTG‑C‑ATCGACTGTCTG‑AACAGTATCACCGCTAAGGAGTGATTATGGATCTCGCGTCATTACGCGCTCAACAAATCGAACTGGCTTCTTCTGTGATCCGCGAGGATCGACTCGATAAAGATCCACCGGATCTGATCGCCGGAGCCGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGAGCGGCGATGGTGCTGCTGAAATATCCCTCGCTTGAGCTGGTCGAG > NC_010473/4296310‑4296691 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 47 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |