New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_010473	305 =	33 (0.860)	14 (0.380)	13/386	2.7	30.4%	intergenic (+50/‑32)	thrL/thrA	thr operon leader peptide/bifunctional aspartate kinase/homoserine dehydrogenase I
	?	NC_010473	= 301	32 (0.860)					intergenic (+46/‑36)	thrL/thrA	thr operon leader peptide/bifunctional aspartate kinase/homoserine dehydrogenase I
Rejected: Polymorphic indel expands or contracts a homopolymer stretch.
Rejected: Unknown rejection reason.

TTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGT‑‑ACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAA‑CACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCGTGTTGCCGATATTCTGG‑AAAGCAATGCCAGGCAGGGGCAGGTGGCCACCGTCCTCTCTGCCCCCGCCAAAATCACCAACCACCTGGTGGCGATGATTGAAAAAACCATTAG  >  NC_010473/116‑503                                                                                                                                                                                                 |                                                                                                                                                                                                                tattgacttaggtcactaaatactttaaccaatataggcatagcgcacagacagataaaaattacagagtacacaacatccatgaaacgcattagcaccaccattaccaccaccatcaccattaccacaggtaacggtgcgggctgacgcgtacaggaaacgcagaaaaagcccgcacctgacagtgcgggcTTTTT‑‑T‑Cg                                                                                                                                                                                                       <  1:4566S38‑M1/8‑1 (MQ=255)  tAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGT‑‑ACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAG‑CACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTT‑‑T‑CGA‑C‑Ca                                                                                                                                                                                                 >  1:14420S14/1‑200 (MQ=255)           aaaTACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGT‑‑ACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTAACACATACAGGAAG‑CACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACg                                                                                                                                                                                       >  1:22358S7/1‑200 (MQ=255)                     aCCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGT‑‑ACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAA‑CACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTT‑‑‑‑CGA‑C‑CAAA‑GGTAACGAGGTAACAAcc                                                                                                                                                                            >  1:12719S60/1‑200 (MQ=255)                            ccaatataggcatagcgcacagacagataaaaattacagagtacacaacatccatgaaacgcattagcaccaccattaccaccaccatcaccattaccacaggtaacggtgcgggctaacgcgtacaggaaacacagaaaaaagcccgcacctgacagtgcgggcTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATg                                                                                                                                                                         <  1:17738S18‑M1/35‑1 (MQ=255)                                 ataggcatagcgcacagacagataaaaattacagagtacacaacatccatgaaacgcattagcaccaccattaccaccaccatcaccattaccacaggtaacggtgcgggctaacgcatacaggaaacacagaaaaaagcccgcacctgacagtgcgggcTTTTT‑‑TTCGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAg                                                                                                                                                                     <  1:29687S1‑M1/40‑1 (MQ=255)                                      gcACAGACAGATAAAAATTACAGAGT‑‑ACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAA‑CACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAgtgtgttgaa                                                                                                                                                            >  1:11851S38/1‑194 (MQ=255)                                      catagcgcacagacagataaaaattacagagtacacaacatccatgaaacgcattagcaccaccattaccaccaccatcaccattaccacaggtaacggtgcgggctgacgcgtacaggaaacacagaaaaaagcccgcacctgacagtgcgggcTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑Ga                                                                                                                                                              <  1:11548S180‑M1/45‑1 (MQ=255)                                       cacaGACAGATAAAAATTACAGAATACACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAA‑CACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAg                                                                                                                                                            <  1:3207S25/200‑1 (MQ=255)                                         cagacagaTAAAAATTACAGAGT‑‑ACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAA‑CACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTT‑‑TTCGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTc                                                                                                                                                         <  1:4054S2/200‑1 (MQ=255)                                         cagacagaTAAAAATTACAGAGT‑‑ACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAA‑CACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTT‑‑‑‑CGA‑C‑CGAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTcgg                                                                                                                                                       >  1:22262S23/1‑200 (MQ=255)                                                      aTTACAGAGT‑‑ACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAA‑CACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGt                                                                                                                                           <  1:17939S12/200‑1 (MQ=255)                                                        tACAGAGT‑‑ACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAA‑CACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTT‑‑‑‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGc                                                                                                                                        >  1:28430S29/1‑200 (MQ=255)                                                           agagT‑‑ACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAA‑CACAGAAAAA‑GCCCGCACCTGACAGTGCGGGCTTTTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCaaa                                                                                                                                     <  1:313S34/200‑1 (MQ=255)                                                              attaacagaacaTCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAA‑CACAGAAAAA‑GCCCGCACCTGACAGTGCGGGCTTTTTTTT‑‑‑‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATg                                                                                                                                   <  1:14423S47/192‑1 (MQ=255)                                                                   cacaACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAA‑CACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAg                                                                                                                                <  1:2283S1/200‑1 (MQ=255)                                                                    acaacaTCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAA‑CACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTT‑‑TTCGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAg                                                                                                                                <  1:13908S43/200‑1 (MQ=255)                                                                     cagagtcctacaacatccatgaaacgcattagcaccaccattaccaccaccatcaccattaccacaggtaacggtgccagcgcgtacaggaaacacaaaaaagcccgcacctgacagtgcgggcTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑a                                                                                                                              <  1:3838S98‑M1/76‑1 (MQ=255)                                                                                  aCGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAA‑CACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTT‑‑‑‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCgtgt                                                                                                               >  1:32776S3/1‑200 (MQ=255)                                                                                   cGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAA‑CACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCgtgt                                                                                                               <  1:5361S6/200‑1 (MQ=255)                                                                                       ttAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAA‑CACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCGTGTTGcc                                                                                                           <  1:23259S59/200‑1 (MQ=255)                                                                                            accaccATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAA‑CACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCGTGTTGCCGatat                                                                                                      <  1:12873S7/200‑1 (MQ=255)                                                                                                 caTTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAA‑CACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCGTGTTGCCGATATTCTgg                                                                                                 <  1:27455S14/200‑1 (MQ=255)                                                                                                   accattaccaccaccatcaccattaccacaggtaacggtgcgggctgacgcgtacaggaaacacagaaaaaagcccgcacctgacagtgcgggcTTTTT‑‑‑‑CGA‑C‑CAAAAGGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCGTGTTGCCGATATTCTGG‑a                                                                                               <  1:12096S13‑M1/106‑1 (MQ=255)                                                                                                          ccaccaccatcaccattaccacaggtaacggtgcgggctgacgcgtacaggaaacacagaaaaaagcccgcacctgacagtgcgggcTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCGTGTTGCCGATATTCTGG‑AAAGCAAt                                                                                        <  1:9624S19‑M1/113‑1 (MQ=255)                                                                                                                   catTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAA‑CACAGAAAAA‑GCCCGCACCTGACAGTGCGGGCTTTTTTTT‑‑TTCGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCGTGTTGCCGATATTCTGG‑AAAGCAATGCcaggcagg                                                                              <  1:21151S51/200‑1 (MQ=255)                                                                                                                           caGGTAACGGTGCGGGCTGACGCGTACAGGAAAACACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCGTGTTGCCGATATTCTGG‑AAAGCAATGCCAGTCAGGG‑CAGGTg                                                                      <  1:12704S5/200‑1 (MQ=255)                                                                                                                            aGGTAACGGTGCGGGCTGACGCGTACAGGAAA‑CACAGAAAAAAGC‑‑GGACCTGACAGTGCGGGCTTTTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCGTGTTGCCGATATTCTGG‑AAAGCAATGCCAGGCAGGGGCAGGTGGcc                                                                   <  1:16810S2/200‑1 (MQ=255)                                                                                                                               tAACGGTGCGGGCTGACGCGTACAGGAAA‑CACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCGTGTTGCCGATATTCTGG‑AAAGCAATGCCAGGCAGGGGCAGGTGGCCa                                                                  >  1:12875S10/1‑200 (MQ=255)                                                                                                                               caggtaacggtgcgggctacacggtacaggaaacacagaaaaaagcccgcacctgacagtgcgggcTT‑‑‑‑‑‑‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATCCGAGTGTTTGAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCGTGTTGCCGATATTCTGG‑AAAGCAATGCCAGGCAGGGGCAGGTGGCCAcc                                                                <  1:16490S4‑M1/134‑1 (MQ=255)                                                                                                                                 ggtaacggtgcgggctgacgcgtacaggaaacacagaaaaaagcccgcacctgacagtgcgggcTTTTT‑‑‑‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCGTGTTGCCGATATTCTGG‑AAAGCAATGCCAGGCAGGGGCAGGTGGCCAcc                                                                <  1:6721S12‑M1/136‑1 (MQ=255)                                                                                                                                  gtaacggtgcgggctgacgcgtacaggaaacacagaaaaaagcccgcacctgacagtgcgggcTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCGTGTTGCCGATATTCTGG‑AAAGCAATGCCAGGCAGGGGCAGGTGGCCAcc                                                                <  1:23070S4‑M1/137‑1 (MQ=255)                                                                                                                                    aacggtgcgggctgacgcgtacaggaaacacagaaaaaagcccgcacctgacagtgcgggcTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCGTGTTGCCGATATTCTGG‑AAAGCAATGCCAGGCAGGGGCAGGTGGCCACCGt                                                              <  1:32391S14‑M1/139‑1 (MQ=255)                                                                                                                                      gtgcggtGACGCGTACAGGAAA‑CACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCGTGTTGCCGATATTCCGGCAAAGCAATGCCAGGCAGGGGCAGGTGGCCACCGTct                                                            <  1:6006S36/194‑2 (MQ=255)                                                                                                                                      cggtgcgggctgacgcgtacaggaaacacagaaaaaagcccgcacctgacagtgcgggcTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCGTGTTGCCGATATTCTGG‑AAAGCAATGCCAGGCAGGGGCAGGTGGCCACCGTcc                                                            <  1:8054S69‑M1/141‑1 (MQ=255)                                                                                                                                           cgggctgacgcgtacaggaaacacagaaaaaagcccgcacctgacagtgcgggcTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCGTGTTGCCGATATTCTGG‑AAAGCAATGCCAGGCAGGGGCAGGTGGCCACCGTCctctct                                                       <  1:24520S19‑M1/146‑1 (MQ=255)                                                                                                                                            tGACGCGTACAGGAAA‑CACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCGTGTTGCCGATATTCTGG‑AAAGCAATGCCAGGCAGGGGCAGGTGGCCACCGTCCTCTCTGc                                                     >  1:899S5/1‑200 (MQ=255)                                                                                                                                                gcgTACAGGAAA‑CACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTT‑‑T‑CTA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCGTGTTGCCGATATTCTGG‑AAAGCAATGCCAGGCAGGGGCAGGTGGCCACCGTCCTGGCTGccccc                                                 <  1:4980S46/200‑1 (MQ=255)                                                                                                                                                        gAAA‑CACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTTTCT‑CGAACTCAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGG‑‑CATCAGTGGCAAATGCAG‑AACGTTTTCTGCGTGTTGCCGAGAT‑CCGG‑AAAGCAATGCCAGGCAGGGGCAGGTGGCCACCGTCCTCTCTGCCCCCGCCaaaa                                          <  1:11611S17/200‑1 (MQ=255)                                                                                                                                                           a‑cacAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCGTGTTGCCGATATTCTGG‑AAAGCAATGCCAGGCAGGGGCAGGTGGCCACCGTCCTCTCTGCCCCCGCCAAAATCac                                      >  1:6875S153/1‑200 (MQ=255)                                                                                                                                                                   cagaaagctcaaccccacaatGCGCGCTTTTTTTT‑‑TACGAGCTCAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCGTGTTGCCGATATTCTGG‑AAAGCAATGCCAGGCAGGGGCAGGTGGCCACCGTCCTCTCTGCCCCCGCCAAAATCaccaac                                  <  1:24381S5/180‑1 (MQ=255)                                                                                                                                                                     aaaaaagcccgcacctgacagtgcgggcTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCGTGTTGCCGATATTCTGG‑AAAGCAATGCCAGGCAGGGGCAGGTGGCCACCGTCCTCTCTGCCCCCGCCAAAATCACCAACCACCt                             <  1:31989S5‑M1/172‑1 (MQ=255)                                                                                                                                                                                    cAGTGCGGGCTTTTTTTT‑‑TTCGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCGTGTTGCCGATATTCTGG‑AAAGCAATGCCAGGCAGGGGCAGGTGGCCACCGTCCTCTCTGCCCCCGCCAAAATCACCAACCACCTGGTGGCGATGATTg               <  1:2042S28/200‑1 (MQ=255)                                                                                                                                                                                      gTGCGGGCTTTTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAGGAACGTTTTCTGCGTGTTGCCGATATTCTGG‑AAAGCAATGCCAGGCAGGGGCAGGTGGCCACCGTCCTGGCTGC‑‑‑‑G‑‑‑AAATCACCAACCACCTGGTGGCGATGATTGAAAAAACCa      <  1:10780S40/200‑1 (MQ=255)                                                                                                                                                                                       tGCGGGCTTTTTTTT‑‑TTCGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCGTGTTGCCGATATTCTGG‑AAAGCAATGCCAGGCAGGGGCAGGTGGCCACCGTCCTCTCTGCCCCCGCCAAAATCACCAACCACCTGGTGGCGATGATTGaaa            <  1:9998S4/200‑1 (MQ=255)                                                                                                                                                                                         cGGGCTTTTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCGTGTTGCCGATATTCTGG‑AAAGCAATGCCAGGCAGGGGCAGGTGGCCACCGTCC‑‑‑CTGCC‑‑‑GCCAAAATCACCAACCACCTGGTGGCGATGATTGAAAAAACCATTa   <  1:11877S87/200‑1 (MQ=255)                                                                                                                                                                                                tttttt‑‑t‑CTA‑CTCAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑A‑CGTTTTCTGCGTGTTGCCGATATTCTGG‑AAAGCAATGCCAGGCAGGGGCAGGTGGCCACCGTCCTCTCTGCCCCCGCCAAAATCACCAACCACCTGGGGGCGATGATCGAAAAAACCATTAg  <  1:28413S18/200‑1 (MQ=255)                                                                                                                                                                                                 |                                                                                                                                                                                                                TTAGGTCACTAAATACTTTAACCAATATAGGCATAGCGCACAGACAGATAAAAATTACAGAGT‑‑ACACAACATCCATGAAACGCATTAGCACCACCATTACCACCACCATCACCATTACCACAGGTAACGGTGCGGGCTGACGCGTACAGGAAA‑CACAGAAAAAAGCCCGCACCTGACAGTGCGGGCTTTTTTTT‑‑T‑CGA‑C‑CAAA‑GGTAACGAGGTAACAACCATGCGAGTGTT‑GAAGTTCGGCGGTACATCAGTGGCAAATGCAG‑AACGTTTTCTGCGTGTTGCCGATATTCTGG‑AAAGCAATGCCAGGCAGGGGCAGGTGGCCACCGTCCTCTCTGCCCCCGCCAAAATCACCAACCACCTGGTGGCGATGATTGAAAAAACCATTAG  >  NC_010473/116‑503

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 48 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.