| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_010473 | 2,806,542 | 689 bp→GAGCGGCCGCCACCGCGGGAAGTTCCTATACTTTCTAGAGAATAGGAACTTCGCATGCACGCAGCATATGC | coding (2‑690/690 nt) | ung → | uracil‑DNA glycosylase |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_010473 | 2806542 | 2807230 | 689 | 21 [0] | [0] 19 | ung | uracil‑DNA glycosylase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_010473 | = 2806541 | 0 (0.000) | 15 (0.610) +GAGCGGCCGCCACCGCGGGAAGTTCCTATACTTTCTAGAGAATAGGAACTTCGCATGCACGCAGCATATGC |
13/256 | 1.2 | 100% | coding (1/690 nt) | ung | uracil‑DNA glycosylase |
| ? | NC_010473 | 2807231 = | 0 (0.000) | intergenic (+1/+47) | ung/yfiF | uracil‑DNA glycosylase/tRNA/rRNA methyltransferase | |||||
AAATCAATAAAAACCACACATCAAGTATGGTCGCAAATGGATTTTATTGTTTTACATCAACTTATGCGGGTGTGAAATTTTACC‑AATTTACATTTTTTTGCACTCGTTTAAGTCTAAAAAATGAGCATGATT‑‑TTGTTCT‑GTAGAAAGAAGCAGTTAAGCTA‑‑G‑GCGGATTGA‑AGATTCGCAGGAGAGCGAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_010473/2806351‑2806541‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTTGCGGGG‑AAATGCCGGATGGCAGAGTTGCCACCCGGCTGATTTATCAGGCTTTATTCTGACGCCACCATTCACCAAGCAAAACGCCGGTTGCGACAGAGATATTCAGCCCGGCAACGTTGCCCGTACCGTCAATCTTCACGCGCAGATCGTTCGGATCGCGTGCGGCATC > NC_010473/2807231‑2807403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| AAATCAATAAAAACCACACATCAAGTATGGTCGCAAATGGATTTTATTGTTTT‑CATCAACTTATGCGGGTGTGAAATTTTACC‑AATTTACATTTTTTTGCACTCGTTTAAGTCTAAAAAATGAGCATGATT‑‑TTGTTCT‑GTAGAAAGAAGCAGTTAAGCTA‑‑G‑GCGGATTGA‑AGATTCGCAGGAGAGCGAGAGAGC‑GGCCGC < 1:6781S7/200‑1 AAACCACACATCAAGTATGGTCGCAAATGGATTTTATTGTTTTACATCAACTTATGCGGGTGTGAAATTTTACCGAATTTACATTTTTTTGCACTCGTTTAAGTCTAAAAAATGAGCATGATT‑‑TTGTTCT‑GTAGAAAGAAGCAGTTAAGCTA‑‑G‑GCGGATTGA‑AGATTCGCAGGAGAGCGAGAGAGC‑GGCCGCCACCGCGG < 1:27835S207/200‑1 TGGTCGCAAATGGATTTTATTGTTTTACATCAACTTATGCGGGTGTGAAATTTTACC‑AATTTACATTTTTTTGCACTCGTTTAAGTCTAAAAAATGAGCATGATT‑‑TTGTTCT‑GTAGAAAGAAGCAGTTAAGCTA‑‑G‑GCGGATTGA‑AGATTCGCAGGAGAGCGAGAGAGC‑GGCCGCCACCGCGGGAAGTTC‑CT‑ATACTTTCT > 1:24699S6/1‑200 GGTCGCAAATGGATTTTATTGTTTTACATCAACTTATGCGGGTGTGAAATTTTACC‑AATTTACATTTTTTTGCACTCGTTTAAGTCTAAAAAATGA‑CATGATT‑‑TTGTTCT‑GTAGAAAGAAGCAGTTAAGCTA‑‑G‑GCGGATTGA‑AGATTCGCAGGAGAGCGAGAGAGC‑GGCCGCCACCGCGGGAAGTTC‑CT‑ATACTTTCTAG > 1:29904S18/1‑200 ATGGATTTTATTGTTTTACATCAACTTATGCGGGTGTGAAATTTTACC‑AATTTACATTTTTTTGCACTCGTTTAAGTCTAAAAAATGAGCATGATT‑‑TTGTTCT‑GTAGAAAGAAGCAGTTAAGCTACGGAGCGGATTGA‑AGATTCGCAGGAGAGCGAGAGAGC‑GGCCGCCACCGCGGGAAGTTC‑CT‑ATACTTTCTAGAata > 1:12855S14/1‑197 GGGTGTGAAATTTTACC‑AATTTACATTTTTTTGCACTCGTTTAAGTCTAAAAAATGAGCACTATT‑‑TTGTTCT‑GTAGAAAGAAGCAGTTAAGCTA‑‑G‑GCGGATTGA‑AGATTCGCAGGAGAGCGAGAGAGC‑GGCCGCCACCGCGGGAAGTTC‑CT‑ATACTTTCTAGAGAATAGGAACTTCGCATGCACGCAGCATATGCATTTG < 1:12743S67/200‑1 TTTACC‑AATTTACATTTTTTTGCACTCGTTTAAGTCTAAAAAATGAGCATGATTTGTTTTTCTTGTAGAAAGAAGCAGTTAAGCTA‑‑G‑GCGGATTGA‑AGATTCGCAGGAGAGCGAGAGAGC‑GGCCGCCACCGCGGGAGTTTCTCTGATACTTTCTAGAGAATAGGAACTTCGCATGCACGCAGCATATGCATTTGCGGtaa < 1:10546S61/200‑4 TTTACC‑AATTTACATTTTTTTGCACTCGTTTAAGTCTAAAAAATGAGCATGATT‑‑TTGTTCT‑GTAGAAAGAAGCAGTTAAGCTA‑‑G‑GCGGATTGA‑AGATTCGCAGGAGAGCGAGAGAGC‑GGCCGCCACCGCGGGAAGTTC‑CT‑ATACTTTCTAGAGAATAGGAACTTCGCATGCACGCAGCATATGCATTTGCGGGG‑AAATGC > 1:1907S78/1‑200 TTACC‑AATTTACATTTTTTTGCACTCGTTTAAGTCTAAAAAATGAGCATGATT‑‑TTGTTCT‑GTAGAAAGAAGCAGTTAAGCTA‑‑G‑GCGGATTGA‑AGATTCGCAGGAGAGCGAGAGAGC‑GGCCGCCACCGCGGGAAGTTC‑CT‑ATACTTTCTAGAGAATAGGAACTTCGCATGCACGCAGCATATGCATTTGCGGGA‑AAATGCC < 1:32087S78/200‑1 ACATTTTTTTGCACTCGTTTAAGTCTAAAAAATGAGCATGATT‑‑TTGTTCT‑GTAGAAAGAAGCAGTTAAGCTA‑‑G‑GCGGATTGA‑AGATTCGCAGGAGAGCGAGAGAGC‑GGCCGCCACCGCGGGAAGTTC‑CT‑ATACTTTCTAGAGAATAGGAACTTCGCATGCACGCAGCATATGCATTTGCGGcatgcccggatggcagagt < 1:14235S5/200‑20 CACTCGTTTAAGTCTAAAAAATGAGCATGATT‑‑TTGTTCT‑GTAGAAAGAAGCAGTTAAGCTA‑‑G‑GCGGATTGA‑AGATTCGCAGGAGAGCGAGAGAGC‑GGCCGCCACCGCGGGAAGTTC‑‑T‑ATACTTTCTAGAGAATAGGAACTTCGCATGCACGCAGCATATGCATTTGCGGGG‑AAATGCCGGATGGCAGAGTTGCCACCCGG > 1:5567S2/1‑200 GTTTAAGTCTAAAAAATGAGCATGATT‑‑TTGTTCT‑GTAGAAAGAAGCAGTTAAGCTA‑‑G‑GCGGATTGA‑AGATTCGCAGGAGAGCGAGAGAGC‑GGCCGCCACCGCGGGAAGTTC‑CT‑ATACTTTCTAGAGAATAGGAACTTCGCATGCACGCAGCATATGCATTTGCGGGGGAAATGCCGGATGGCAGAGTTGCCACCCGGCTG < 1:2149S1/200‑1 TTCT‑GTAGAAAGAAGCAGTTAAGCTA‑‑G‑GCGGATTGA‑AGATTCGCAGGAGAGCGAGAGAGC‑GGCCGCCACCGCGGGAAGTTC‑CT‑ATACTTTCTAGAGAATAGGAACTTCGCATGCACGCAGCATATGCATTTGCGGGG‑AAATGCCGGATGGCAGAGTTGCCACCCGGCTGATTTATCAGGCTTTATTCTGACGCCACCATT < 1:3103S50/200‑1 T‑GTAGAAAGAAGCAGTTAAGCTA‑‑G‑GCGGATTGAGAGATTCGCAGGAGAGCGAGAGAGC‑GGCCGCCACCGCGGGAAGTTC‑CT‑ATACTTTCTAGAGAATAGGAACTTCGCATGCACGCAGCATATGCATTTGCGGGG‑AAATGCCGGATGGCA‑AACTGCCACCCGGCTGATTTATCAGGCTTTATTCTGACGCCACCATTCAC < 1:9708S93/200‑1 AAGAAGCAGTTAAGCTA‑‑G‑GCGGATTGA‑AGATTCGCAGGAGAGCGAGAGAGCTGGCCGCCACCGCGGGAAGTTC‑CT‑ATACTTTCTAGAGAATAGGAACTTCGCATGCACGCAGCATATGCATTTGCGGGG‑AAATGCCGGATGGCAGAGTTGCCACCCGGCTGATTTATCAGGCTTTATTCTGACGCCACCATTCACCAAGC < 1:1894S17/200‑1 AAGAAGCAGTTAAGCTA‑‑G‑GCGGATTGA‑AGATTCGCAGGAGAGCGAGAGAGC‑GGCCGCCACCGCGGGAAGTTC‑CT‑ATACTTTCTA‑‑‑AATAG‑AACT‑CGCATGCACGCAGCATATGCATTTGCGGGG‑AAATGCCGGATGGCAGAGTTGCCACCCGGCTGATTTATCAGGCTTTATTCTGACGCCACCATTCACCAAGCAAAACG > 1:23878S24/1‑200 AGTTAAGCTA‑‑G‑GCGGATTGA‑AGATTCGCAGGAGAGCGAGAGAGC‑GGCCGCCACCGCGGGAAGTTC‑CT‑ATACTTTCTAGAGAATAGGAACTTCGCATGCACGCAGCATATGCATTTGCGGGG‑AAATGCCGGATGGCAGAGTTGCCACCCGGCTGATTTATCAGGCTTTATTCTGACGCCACCATTCACCAAGCAAAACGCC < 1:18994S60/200‑1 A‑‑G‑GCGGATTGA‑AGATTCGCAGGAGAGCGAGAGAGC‑GGCCGCCACCGCGGGAAGTTC‑CT‑ATACTTTCTAGAGAATAGGAACTTCGCAT‑‑AGGCA‑TAT‑TGCGTTTGCGGGG‑AAATGCCGGATGGCAGAGTTGCCACCCGGCTGATTTATCAGGCTTTATTCTGACGCCACCATTCACCAAGCAAAACGCCGGTTGCGACAGAG > 1:14233S10/1‑200 G‑GCGGATTGA‑AGATTCGCAGGAGAGCGAGAGAGC‑GGCCGCCACCGCGGGAAGTTC‑CT‑ATACTTTCTAGAGAATAGGAACTTCGCGTGCACGCAGCATATGCATTTGCGGGG‑AAATGCCGGATGGCAGAGTTGCCACCCGGCTGATTTATCAGGCTTTATTCTGACGCCACCATTCACCAAGCAAAACGCCGGTTGCGACA > 1:723S1/1‑200 AGGAGAGCGAGAGAGC‑GGCCGCCACCGCGGGA‑GTTC‑‑A‑ATACTTTCTAGAGAATAGGAACTTCGCATGCACGCAGCATATGCATTTGCGGGG‑AAATGCCGGATGGCAGAGTTGCCACCCGGCTGATTTATCAGGCTTTATTCTGACGCCACCATTCACCAAGCAAAACGCCGGTTGCGACAGAGATATTCAGCCCGGCAAC < 1:29180S16/200‑1 CACCGCGG‑AAGTTC‑CT‑ATACTTTCTAGAGAATAGGAACTTCGCATGCACGCAGCATATGCATTTGCGGGG‑AAATGCCGGATGGCAGAGTTGCCACCCGGCTGATTTATCAGGCTTTATTCTGACGCCACCATTCACCAAGCAAAACGCCGGTTGCGACAGAGATATTCAGCCCGGCAACGTTGCCCGTACCGTCAATCTT < 1:6781S6/200‑1 AAGTTC‑CT‑ATACTTTCTAGAGAATAGGAACTTCGCATGCACGCAGCATATGCATTTGCGGGG‑AAATGCCGGATGGCAGAGTTGCCACCCGGCTGATTTATCAGGCTTTATTCTGACGCCACCATTCACCAAGCAAAACGCCGGTTGCGACAGAGATATTCAGCCCGGCAACGTTGCCCGTACCGTCAATCTTCACGCGCA < 1:27835S206/200‑1 AGAGAATAGGAACTTCGCATGCACGCAGCATATGCATTTGCGGGG‑AAATGCCGGATGGCAGAGTTGCCACCCGGCTGATTTATCAGGCTTTATTCTGACGCCACCATTCACCAAGCAAAACGCCGGTTGCGACAGAGATATTCAGCCCGGCAACGTTGCCCGTACCGTCAATCTTCACGCGCAGATCGTTCGGATCGCGT > 1:24699S7/1‑200 GGAACTTCGCATGCACGCAGCATATGCATTTGCGGGG‑AAATGCCGGATGGCAGAGTTGCCACCCGGCTGATTTATCAGGCTTTATTCTGACGCCACCATTCACCAAGCAAAACGCCGGTTGCGACAGAGATATTCAGCCCGGCAACGTTGCCCGTACCGTCAATCTTCACGCGCAGATCGTTCGGATCGCGTGCGGCATC > 1:12855S15/1‑200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| AAATCAATAAAAACCACACATCAAGTATGGTCGCAAATGGATTTTATTGTTTTACATCAACTTATGCGGGTGTGAAATTTTACC‑AATTTACATTTTTTTGCACTCGTTTAAGTCTAAAAAATGAGCATGATT‑‑TTGTTCT‑GTAGAAAGAAGCAGTTAAGCTA‑‑G‑GCGGATTGA‑AGATTCGCAGGAGAGCGAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_010473/2806351‑2806541‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTTGCGGGG‑AAATGCCGGATGGCAGAGTTGCCACCCGGCTGATTTATCAGGCTTTATTCTGACGCCACCATTCACCAAGCAAAACGCCGGTTGCGACAGAGATATTCAGCCCGGCAACGTTGCCCGTACCGTCAATCTTCACGCGCAGATCGTTCGGATCGCGTGCGGCATC > NC_010473/2807231‑2807403 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 48 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |