| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_010473 | 3816235 = | NA (NA) | 36 (0.950) | 33/394 | 0.3 | 94.8% | intergenic (‑35/‑45) | hokA/ECDH10B_RS25725 | type I toxin‑antitoxin system toxin HokA/IS3‑like element IS150 family transposase |
| ? | NC_010473 | 4028795 = | 2 (0.050) | intergenic (+4/‑163) | kup/rbsD | low affinity potassium transporter Kup/D‑ribose pyranase | |||||
AGGATTAAGTTGCCGGATGATGGAAACCTCCTTCTTTATGTCGCATGAGTCGTT‑‑‑GATCCTCGGCAAACGCCCGTGGTATTTGCGTCTGCGCGGCAAGCTGTACTTGCTGCTGCAACGTAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCC‑AAACAGGGTTATCGAACTGGGTACTCAGG‑‑TCGAAATCTAACGCCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATGTAAAACGTTTC‑GAGGTTGATCACATTT‑CCGTAACGTCACGATGGTTTTCCCAACTCAGTCAGGATTAAACTGTGGGTCAGCGAAACGTTTCGCTGATGGAGAAAAAAATGAAAAAAGGCACCGTTCTTAATTCTGATAT > NC_010473/4028596‑4028989 | aGGATTAAGTTGCCGGATGATGGAAACCTCCTTCTTTATGTCGCATGAGTCGTT‑‑‑GATCCTCGGCAAACGCCCGTGGTATTTGCGTCTGCGCGGCAAGCTGTACTTGCTGCTGCAACGTAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCC‑AA‑CAGGGTTATCGAACTGGGTACTCAGG‑‑TCGAAATCTAACGCCa < 1:8518S11/200‑1 (MQ=255) ccatgtttttcatagagggcaacccatgtcctgacctgggttcggggacaccaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtaCAG‑‑‑ACGc < 1:15008S2‑M2/7‑1 (MQ=255) gtttttcatagagggcaacccatgtcctgacctgggttaagggggacaccaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacaacttcgaggcgcttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtaCAG‑‑‑Acgcctac > 1:6740S7‑M2/190‑198 (MQ=255) atgatgGAAACCTC‑‑TCTTTATGTCGCATGAGTCGTT‑‑‑GATCCTCGGCAAACGCCCGTGGTATTTGCGTCT‑‑GCGGCAAGCCGGAACTGCTGCTGCAACGTAATGCGCTGCGTGCACCAGATCAATTTGAA‑TCCCGCC‑AAACAGGGTTATCGAACTGGGTACTCAGG‑‑TCGAAATCTAACGCCaacgtctggagctaccgcgga < 1:23630S1/200‑21 (MQ=255) tgatgGAAACCTCCTTCTTTATGTCGCATGAGTCGTT‑‑‑GATCCTCGGCAAACGCCCGTGGTATTTGCGTCTGCGCGGCAAGCTGTACTTGCTGCTGCAACGTAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCC‑AAACAGGGTTATCGAACTGGGTACTCAGG‑‑TCGAAATCTA‑CGCCAG‑‑‑ACtgtactgaccccaa > 1:7268S28‑M2/1‑186 (MQ=255) ttcatagagggcaacccatgtcctgacctgggttcgggggacaccaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑ttt < 1:29590S80‑M2/14‑1 (MQ=255) tcatagagggcaacccatgtcctgacctgggttcgggggacgccaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑Tttc > 1:22622S21‑M2/186‑200 (MQ=255) gattaatggacttcttcatgttgtatTAGTCGTT‑‑‑GATCCTCGGCAAACGCCCGTGGTATTTGCGTCTGCGCGGCAAGCTGTACTTGCTGCTGCAACGTAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCC‑AAACAGGGTTATCGAACTGGGTACTCAGG‑‑TCGAAATCTAACGCCAG‑‑‑ACtgtactgaccccaaaa > 1:5282S75‑M2/11‑184 (MQ=255) aaCCTCCTTCTTTATGTCGCATGAGTCGTTCCAGATCCTCGGCAAACGCCCGTGGTATTTGCGTCTGCGCGGCAAGCTGTACTTGCTGCTGCAACGTAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCC‑AAACAGGGTTATCGAACTGGGTACTCAGG‑‑TCGAAATCTAACGCCAG‑‑‑ACtgtactgacccaaaaag < 1:3820S33‑M2/200‑18 (MQ=255) gggcaacccatgtcctgacctgggttcgggacaccaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAgg < 1:3077S5‑M2/24‑1 (MQ=255) cttTATGTCGCATGAGCTGTT‑‑‑TAT‑‑T‑GGCAAACGCCCGTGGTATTTGCGTCTGCGCGGCAAG‑TGG‑‑TTGC‑GCCGCAACGTAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCC‑AAACAGGGTTATCGAACTGGGTACTCAGG‑‑TCGAAATCTAACGCCAG‑‑‑ACtgtactgaccccaaaaagttggacagttaaacacga > 1:15008S9‑M2/1‑164 (MQ=255) tatgtcctgacctgggttcgggggacaccaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCGt < 1:28514S15‑M2/30‑1 (MQ=255) atgtcctgacctgggttcgggggacaccaaaacgtgccaagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacataggggctattccatttcatcgtccaacaaaatgggtgcagtaCAGAGAACGCCTCC‑TTTCTTCATAAGGGGGCGtt > 1:23916S43‑M2/167‑200 (MQ=255) acctgggtttggcacactgaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCG‑TTTTGTTTTc < 1:10020S21‑M2/39‑1 (MQ=255) tGAGTCGTT‑‑‑GATCCTCGGCAAACGCCCGTGGTATTTGCATCTGCGCGGCAAGCTGTACTTGCTGCTGCAACGTAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCCCAAACAGGGTTATCGAACTGGGTACTCAGG‑‑TAGAAATCTAACGCCAG‑‑‑ACtgtactgaccccaaaaagttggacagttaaacacgaggca < 1:27023S2‑M2/200‑41 (MQ=255) accaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccattccatcgtccaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATg > 1:6438S9‑M2/145‑200 (MQ=255) ccaaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagaaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATGt < 1:5322S25‑M2/57‑1 (MQ=255) caaaacgtgccgagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaactgggtgcagtaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATGTa < 1:1591S82‑M2/58‑1 (MQ=255) cGGCAAACGCCCGTGGTATTTGCGTCTGCGCGGCAAGCTGTACTTGCTGCTGCAACGTAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCC‑AAACAGGGTTATCGAACTGGGTACTCAGG‑‑TCGAAATCTAACGCCAG‑‑‑ACtgtactgaccccaaaaagttggacagttaaacacgaggcatatcagtctgatttgc < 1:22622S14‑M2/200‑57 (MQ=255) gagatgatcctgtaaccatcatcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCG‑TTTTGTTTTCATGGTTAATCACCATGTAAAACGTTTC‑GAg > 1:24502S6‑M2/132‑200 (MQ=255) tgtaaccatcatcagttgtgaagtagtgaatttgtaggacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATGTAAAACGTTTC‑GAGGTTGAt > 1:17391S15‑M2/125‑200 (MQ=255) tGCGTCTGCGCGGCAAGCTGTACTTGCTGCTGCAACGTAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCC‑AAACAGGGTTATCGAACTGGGTACTCAGG‑‑TCGAAATCTAACGCCAG‑‑‑ACtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagac < 1:23916S36‑M2/200‑77 (MQ=255) tCTGCGCGGCAAGCTGTACTTGCTGCTGCAACGTAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCC‑AAACAGGGTTATCGAACTGGGTACTCAGG‑‑TCGAAATCTAACGCCAG‑‑‑ACtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttt > 1:10020S28‑M2/1‑120 (MQ=255) tcatcagttgtgaagtagtgattcacaacttttttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATGTAAAACGTTTC‑GAGGTTGATCACAttt > 1:5126S13‑M2/118‑200 (MQ=255) tcatcagttgtgaaattatgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATGTAAAACATTTC‑GAGGTTGATCACATTT‑CCGt > 1:2970S60‑M2/114‑200 (MQ=255) cgGCAAGCTGTACTTGCTGCTGCAACGTAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCC‑AAACAGGGTTATCGAACTGGGTACTCAGGGTTCGAAATTTAACGCCAG‑‑‑ACtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaat < 1:6438S2‑M2/200‑85 (MQ=255) atcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATGTAAAACGTTTC‑GAGGTTGATCACATTT‑CCGTaa < 1:15609S15‑M2/89‑1 (MQ=255) tcagttgtgaagtagtgattcacgacttcaaggcgcttttcaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtaC‑‑‑‑‑ACGCTCCC‑TTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATGTAAAACGTTTC‑GAGGTTGATCACATTT‑CCGTAACGTc < 1:4973S7‑M2/91‑1 (MQ=255) ttgtgaagtagtgattcacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATGTAAAACGTTTC‑GAGGTTGATCACATTT‑CCGTAACGTCa < 1:5477S66‑M2/94‑1 (MQ=255) gCTGTACTTGCTGCTGCAACGTAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCC‑AAACAGGGTTATCGAACTGGGTACTCAGG‑‑TCGAAATCTAACGCCAG‑‑‑ACtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggct > 1:5322S32‑M2/1‑108 (MQ=255) tACTTGCTGCTGCAACGTAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCC‑AAACAGGGTTATCGAACTGGGTACTCAGG‑‑TCGAAATCTAACGCCAG‑‑‑ACtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaatt > 1:1591S89‑M2/1‑104 (MQ=255) aCTTGCTGCTGCAACGTAATGCGCTGCGTGCACCAGATCAATTTGAA‑TCCCGCC‑AAACAGGGTTATCGAACTGGGTACTCAGG‑‑TCGAAATCTAACGCCAG‑‑‑ACtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattct > 1:24600S48‑M2/1‑102 (MQ=255) cacgacttcaaggcgcttttcaaaaggggtattttggctttgagcatattaggggctattccatttcatcgtccaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCGCTTTCGTTTTCATGGTTAATCACCATGTAAAACGTTTC‑GAGGTTGATCACATTT‑CCGTAACGTCACGATGGTTTTCCCa < 1:29730S50‑M2/108‑1 (MQ=255) cacgacttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCGTTTTTG‑CTTCATGGTTAATCACCATGTAAAACGTTTC‑GAGGTTGATCACATTT‑CCGTAACGTCACGATGGTTTTCCCAACt > 1:23928S4‑M2/91‑200 (MQ=255) cAACGTAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCC‑AAACAGGGTTATCGAACTGGGTACTCAGG‑‑TCGAAATCTAACGCCAG‑‑‑ACtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagacctttcggctggctaattcttctgctgttgtag < 1:5126S6‑M2/200‑109 (MQ=255) ttcaaggcgcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATGTAAAACGTTTCAGAGGTTGATCACATTT‑CCGTAACGTCACGATGGTTTTCCCAACtcagt > 1:15990S7‑M2/85‑200 (MQ=255) aaTGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCC‑AAACAGGGTTATCGAACTGGGTACTCAGG‑‑TCGAAATCTAACGCCAG‑‑‑ACtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtat < 1:17391S8‑M2/200‑115 (MQ=255) gcttttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCCTTTTCTTCATAAGGGGGCGTTTTTG‑‑TTCATGGTTAATCACCATGTAAAACGTTTC‑GAGGTTGATCACATTT‑CCGTAACGTCACGATGGTTTTCCCAACTCAGTCAGGATTaaa > 1:14037S2‑M2/77‑200 (MQ=255) ttcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATGTAAAACGTTTC‑GAGGTTGATCACATTT‑CCGTAACGTCACGCTGGTTTTCCGGAC‑CAGTCAGGATTAAACtgt < 1:26725S56‑M2/128‑1 (MQ=255) aCCAGATCAATTTGAAATCCCGCC‑AAACAGGGTTATCGAACTGGGTACTCAGG‑‑TCGAAATCTAACGCCAG‑‑‑ACtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgt > 1:15609S22‑M2/1‑72 (MQ=255) ccAGATCAATTTGAAATCCCGCC‑AAACAGGGTTATCGAACTGGGTACTCAGG‑‑TCGAAATCTAACGCCAG‑‑‑ACtgtactgaccccgaaagagtttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccg < 1:2970S53‑M2/200‑130 (MQ=255) aTCAATTTGAAATCCCGCC‑AAACAGGGTTATCGAACTGGGTACTCAGG‑‑TCGAAATCTAACGCCAG‑‑‑ACtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacag > 1:4973S14‑M2/1‑67 (MQ=255) ttttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATGTAAAACGTTTC‑AAGGTCAATAGCATTTCCCGTAACGTCACGATGGTTTTCCCAACTCGGTC‑GGATTAAACTGTGGGTCAGCGaa > 1:8734S89‑M2/61‑200 (MQ=255) attttggctttgacatattaggggctattccatttcgtacgtaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATGTAAAACGTTTC‑GAGGTTGATCACATTT‑CCGTAACGTCACGATGGTTTTCCCAACTCAGTCAGGATTAAACTGTGGGTCAGCGaa > 1:21921S11‑M2/61‑200 (MQ=255) tCCCGCC‑AAACAGGGTTATCGAACTGGGTACTCAGG‑‑TCGAAATCTAACGCCAG‑‑‑ACtgtactgacccaaaaagttggacagttaaacacgaggcatataggtctgattccatattcaattggagtcagaccttttaatttcaggctaattttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgc > 1:29730S57‑M2/1‑55 (MQ=255) acatattaggggctattccatttcatcgtccgacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATGTAAAACGTTTC‑GAGGTTGATCACATTT‑CCGTAACGTCACGATGGTTTTCCCAACTCAGTCAGGATTAAACTGTGGGTCAGCGAAACGTTTCGCTg > 1:3228S173‑M2/50‑200 (MQ=255) tattaggggctattccatttcatcgtccaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATGTAAAACATTTC‑GAGGTTGATCACATTT‑CCGTAACGTCACGATGGTTTTCCCAACTCAGTCAGGATTAAACTGTGGGTCAGCGAAACGTTTCGCTGATg > 1:10649S20‑M2/47‑200 (MQ=255) tattaggggctattccatttcatcgtccaacaaaatgggtgataCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATGTAAAACGTTTC‑GAGGTTGATCACATTT‑CCGTAACGTCACGATGGTTTTCCCAACTCAGTCAGGATTAAACTGTGGGTCAGCGAAACGTTTCGCTGatgaa < 1:27960S2‑M2/156‑3 (MQ=255) ggggctattccatttcatcgtccaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATGTAAAACGTTTC‑GAGGTTGATCACATTT‑CCGTAACGTCACGATGGTTTTCCCAACTCAGTCAGGATTAAACTGTGGGTCAGCGAAACGTTTCGCTGATGGAGaa > 1:17142S2‑M2/42‑200 (MQ=255) ggggctattccatttcatcgtccaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATGTAAAACGTTTC‑GAGGTTGATCACATTT‑CCGTAACGTCACGATGGTTTTCCCAACTCAGTCAGGATTAAACTGTGGGTCAGCGAAACGTTTCGCTGATGGAGaa < 1:8518S3‑M2/159‑1 (MQ=255) catttcatcgtccaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATGTAAAACGTTTC‑GAGGTTGATCACATTT‑CCGTAACGTCACGATGGTTTTCCCAACTCAGTCAGGATTAAACTGTGGGTCAGCGAAACGTTTCGCTGATGGAGAAAAAAATGaaa < 1:5393S9‑M2/169‑1 (MQ=255) atttcatcgtccaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATGTAAAACGTTTCAGAGGTTGATCACATTT‑CCGTAACGTCACGATGGTTTTCCCAACTCAGTCAGGATTAAACTGTGGGTCAGCGAAACGTTTCGCTGATGGAGAAAAAAATGaaa > 1:3820S41‑M2/31‑200 (MQ=255) catcgtccaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATGTAAAACGTTTC‑GAGGTTGATCACATTT‑CCGTAACGTCACGATGGTTTTCCCAACTCAGTCAGGATTAAACTGTGGGTCAGCGAAACGTTTCGCTGATGGAG‑AAAAAATGAAAAAAGGc > 1:28259S7‑M2/27‑200 (MQ=255) atcgtccaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATGTAAAACGTTTC‑GAGGTTGATCACATTT‑CCGTAACGTCACGATGGTTTTCCCAACTCAGTCAGGATTAAACTGTGGGTCAGCGAAACGTTTCGCTGATGGAGAAAAAAATGAAAAAAGGc < 1:5282S67‑M2/175‑1 (MQ=255) tcgtccaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCG‑TTTTGTTTTCATGGTTAATCACCATGTAAAACGTTTC‑GAGGTTGATCACATTT‑CCGTAACGTCACGATGGTTTTCCCAACTCAGTCAGGATTAAACTGTGGGTCAGCGAAACGTTTCGCTGATGGAGAAAAAAATGAAAAAAGGCAc < 1:7268S20‑M2/176‑1 (MQ=255) tCAGG‑‑TCGAAATCTAACGCCAG‑‑‑ACtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaa < 1:8734S82‑M2/200‑177 (MQ=255) ccaacaaaatgggtgcagtaCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATGTAAAACGTTTC‑GAGGTTGATCACATTT‑CCGTAACGTCACGATGGTTTTCCCAACTCAGTCAGGATTAAACTGTGGGTCAGCGAAACGTTTCGCTGATGGAGAAAAAAATGAAAAAAGGCACCGt < 1:20975S10‑M2/180‑1 (MQ=255) gg‑‑TCGAAATCTAACGCCAG‑‑‑ACtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaaca < 1:10573S7‑M2/200‑180 (MQ=255) cGAAATCTAACGCCAG‑‑‑ACtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtatcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactcc < 1:21921S4‑M2/200‑183 (MQ=255) aaaTCTAACGCCAG‑‑‑ACtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccg < 1:4923S40‑M2/200‑185 (MQ=255) gCCAG‑‑‑ACtgtatgaccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacgctccgactttaaggttc < 1:10649S13‑M2/200‑194 (MQ=255) gCCAG‑‑‑ACtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcagaccttttaatttcaggctaattcttctgctgttgtagtattcaatatattccgtaacagcatccttcagttcgcttatattactgaactcatcaagataaaaacactccgactttaagg > 1:5393S16‑M2/1‑7 (MQ=255) | AGGATTAAGTTGCCGGATGATGGAAACCTCCTTCTTTATGTCGCATGAGTCGTT‑‑‑GATCCTCGGCAAACGCCCGTGGTATTTGCGTCTGCGCGGCAAGCTGTACTTGCTGCTGCAACGTAATGCGCTGCGTGCACCAGATCAATTTGAAATCCCGCC‑AAACAGGGTTATCGAACTGGGTACTCAGG‑‑TCGAAATCTAACGCCAG‑‑‑ACGCCTCC‑TTTCTTCATAAGGGGGCGTTTTTGTTTTCATGGTTAATCACCATGTAAAACGTTTC‑GAGGTTGATCACATTT‑CCGTAACGTCACGATGGTTTTCCCAACTCAGTCAGGATTAAACTGTGGGTCAGCGAAACGTTTCGCTGATGGAGAAAAAAATGAAAAAAGGCACCGTTCTTAATTCTGATAT > NC_010473/4028596‑4028989 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 47 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |