New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_010473	= 3170326	0 (0.000)	40 (1.050)	37/396	0.2	100%	pseudogene (294/1257 nt)	cmtA	PTS mannitol transporter subunit IICB
	?	NC_010473	3225914 =	NA (NA)					coding (33/1137 nt)	yghO	protein YghO

GGTAATACGCCCAACTATCTGCCCCG‑CTTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTC‑GCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAA‑‑CTTACCTTCGCCG‑ACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAG  >  NC_010473/3225725‑3226106                                                                                                                                                                                                  |                                                                                                                                                                                                        ggTAATACGCCCAACCATCTGCCCCG‑CTTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTC‑GCAGACAAATGCTCGTTGCGTTCAATGAATAA‑GGGGGTATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AAc                                                                                                                                                                                             <  1:13717S13/200‑1 (MQ=255)            gtaccaTCTGCCCCGGCTTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTC‑GCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTg                                                                                                                                                                                    <  1:32840S22/195‑1 (MQ=255)              aCTATCTGCCCCG‑CTTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTC‑GCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGata                                                                                                                                                                                 >  1:24138S138/1‑200 (MQ=255)                     gCCCCG‑CTTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTC‑GCAGACAAATGCTCGTTGCGTTCAATGAAT‑‑‑GGGGG‑ATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGt                                                                                                                                                                   >  1:294S101/1‑200 (MQ=255)                         tg‑CTTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTC‑GCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGt                                                                                                                                                                   <  1:29771S4/199‑1 (MQ=255)                            cTTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTC‑GCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTAGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGttt                                                                                                                                                                 >  1:1762S23/1‑200 (MQ=255)                              ttttttGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTC‑GCAGACAAATGCT‑GT‑GCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCa                                                                                                                                                             >  1:7467S23/1‑200 (MQ=40)                                     ccacccacGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTC‑GCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTgg                                                                                                                                                        <  1:28858S18/200‑1 (MQ=40)                                       acccacGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTC‑GCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAg                                                                                                                                                      <  1:9197S9/200‑1 (MQ=40)                                        cccacGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTC‑GCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGc                                                                                                                                                     <  1:18608S8/200‑1 (MQ=40)                                            cGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTC‑GCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATa                                                                                                                                                 <  1:19209S19/200‑1 (MQ=40)                                            cGCCTGCCAGATGATATGGTCCGTCCC‑GGATTTTTCAGC‑GACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGCATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCAtca                                                                                                                                                >  1:29646S116/1‑198 (MQ=38)                                                 gCCAGATGATATGGTCCGTCCCCGGATTTTTC‑GCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGacag                                                                                                                                            >  1:11743S17/1‑197 (MQ=39)                                                        gatATGGTCCGTCCCCGGATTTTTC‑GCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTtca                                                                                                                                     >  1:30620S40/1‑200 (MQ=39)                                                            tGGTCCGTCCCCGGATTTTTC‑GCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAAC‑GGGTTCATCATg                                                                                                                                >  1:22093S115/1‑200 (MQ=39)                                                                 cgtccCCGGATTTTTC‑GCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGtc                                                                                                                            <  1:23533S7/200‑1 (MQ=38)                                                                 cgtccCCGGATTTTTC‑GCAGACAAATGCTCGTTGCGTTCAATCAATAAAGGGGGTATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGtc                                                                                                                            >  1:4144S9/1‑200 (MQ=38)                                                                     cccGGATTTTTC‑GCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGtcatca                                                                                                                        >  1:31270S56/1‑200 (MQ=38)                                                                         taTTTTTC‑GCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAA‑‑Cta                                                                                                                  <  1:9156S8/199‑2 (MQ=38)                                                                          aTTTTTC‑GCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAA‑‑CTTa                                                                                                                 <  1:27976S77/200‑1 (MQ=38)                                                                                  gCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCGCAACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAA‑‑CTTACCTTCg                                                                                                           <  1:973S37/200‑1 (MQ=37)                                                                                    aGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCAT‑GAACAGGGTTCATCATGAGTCATCAA‑‑CTTACCTTCGCCG‑a                                                                                                      >  1:4970S27/1‑200 (MQ=37)                                                                                      aCAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAA‑‑CTTACCTTCGCCG‑Ac                                                                                                     <  1:4928S42/200‑1 (MQ=37)                                                                                                gTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAA‑‑CTTACCTTCGCCG‑ACAGTGAATTca                                                                                           >  1:24287S14/1‑200 (MQ=35)                                                                                                gTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAA‑‑CTTACCTTCGCCG‑ACAGTGAATTca                                                                                           >  1:30416S83/1‑200 (MQ=35)                                                                                                 ttGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAA‑‑CTTACCTTCGCCG‑ACAGTGAATTcag                                                                                          >  1:27673S29/1‑200 (MQ=35)                                                                                                     gTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAA‑‑CTTACCTTCGCCG‑ACAGTGAATTCAGCAGt                                                                                      <  1:3628S16/200‑1 (MQ=35)                                                                                                         aaTGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAA‑‑CTTACCTTCGCCG‑ACAGTGAATTCAGCAGTAAgc                                                                                  <  1:22912S47/200‑1 (MQ=35)                                                                                                                          tCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAA‑GCTGATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAA‑‑CTTACCTTCGCCG‑ACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGaaaa                                                                 <  1:32111S81/200‑1 (MQ=18)                                                                                                                            cAGTTTGGATCGTCGGGAGTAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAA‑‑CTTACCTTCGCCG‑ACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAag                                                                <  1:15616S11/200‑1 (MQ=18)                                                                                                                               ttctgATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAAAACCAACCTTCGCCG‑ACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAagag                                                              <  1:30403S7/196‑1 (MQ=18)                                                                                                                                   gattgtcgGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTG‑A‑AACAAGTCCCTG‑‑AT‑‑‑GAGATTATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAA‑‑CTTACCTTCGCCG‑ACAGTGATTTTAGC‑‑‑AAGCGCTGTCAGACCAGAAAAGAGATTTTCTTGTcc                                                  <  1:4184S7/196‑1 (MQ=18)                                                                                                                                               tAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCC‑TGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAA‑‑CTTACCTTCGCCG‑ACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATg                                            <  1:8885S156/200‑1 (MQ=17)                                                                                                                                                  aGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAA‑‑CTTACCTTCGCCG‑ACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAGAAGATTTTCTTGTCCCGCATGGa                                          <  1:23747S24/200‑1 (MQ=17)                                                                                                                                                   gTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAA‑‑CTTACCTTCGCCG‑ACAGTGAATTGAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAg                                         <  1:14303S3/200‑1 (MQ=17)                                                                                                                                                   gTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAA‑‑CTTACCTTCGCCG‑ACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAg                                         <  1:30854S19/200‑1 (MQ=32)                                                                                                                                                       tgaCGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAA‑‑CTTACCTTCGCCG‑ACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGa                                     <  1:29831S66/200‑1 (MQ=32)                                                                                                                                                              aaaGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATATAAAGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAA‑‑CTTACCTTCGCCGGACAGTGAATTCAGCAGTAAGCACCATGCGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTc                                  >  1:6840S40/1‑200 (MQ=14)                                                                                                                                                               aaGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATCGGTCAT‑AA‑‑CT‑ACCTTCGCCG‑ACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATg                           >  1:1305S3/1‑200 (MQ=14)                                                                                                                                                                aGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑CAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAA‑‑CTTACCTTCGCCG‑ACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCAt                            >  1:20956S13/1‑200 (MQ=14)                                                                                                                                                                                  ggTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAA‑‑CTTACCTTCGCCG‑ACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGaa           <  1:24114S26/200‑1 (MQ=11)                                                                                                                                                                                   gTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAA‑‑CTTACCTTCGCCG‑ACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAg          <  1:23450S26/200‑1 (MQ=11)                                                                                                                                                                                   gTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAA‑‑CTTACCTTCGCCG‑ACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAg          >  1:14239S52/1‑200 (MQ=11)                                                                                                                                                                                     cATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAA‑‑CTTACCTTCGCCG‑ACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTc        >  1:19668S44/1‑200 (MQ=11)                                                                                                                                                                                       tttttATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAA‑‑CTTACCTTCGCCG‑ACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCAt      >  1:9787S8/1‑200 (MQ=11)                                                                                                                                                                                           tattaAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAA‑‑CTTACCTTCGCCG‑ACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAg  >  1:24312S12/1‑200 (MQ=11)                                                                                                                                                                                                  |                                                                                                                                                                                                        GGTAATACGCCCAACTATCTGCCCCG‑CTTTTTTTGCCACCCACGCCTGCCAGATGATATGGTCCGTCCCCGGATTTTTC‑GCAGACAAATGCTCGTTGCGTTCAATGAATAAAGGGGGTATCCAGTTTGGATCGTCGGGA‑TAAAGTGATGACGGAAAAGC‑GATAAATGCCTTAAGGTCATTTTTATTAAGGAAGGTGCG‑AACAAGTCCCTGATAT‑‑‑GAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAA‑‑CTTACCTTCGCCG‑ACAGTGAATTCAGCAGTAAGCGCCGTCAGACCAGAAAAGAGATTTTCTTGTCCCGCATGGAGCAGATTCTGCCATGGCAAAACATGGTGGAAGTCATCGAG  >  NC_010473/3225725‑3226106

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 49 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.