New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_010473	= 306759	38 (0.990)	46 (1.200)	40/398	0.1	54.8%	intergenic (+109/‑386)	ECDH10B_RS25865/pdeL	protein YahV/DNA‑binding transcriptional activator/c‑di‑GMP phosphodiesterase PdeL
	?	NC_010473	3211929 =	NA (NA)					pseudogene (1/603 nt)	nupG	nucleoside permease NupG

CATTACGTTCTTAATACCGTAGCGGCTTAAGAAGAACGGGATGGTCAGAATGAACAGGGTTTCAGAGATCTGCGAAATCGACATGATGATTGACGC‑ATGCTGCACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACAC‑ATCTTGTCATATGATCAA‑ATG‑GTTTCGCCAAAAATCAATAATCAGACAACAAAATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACG  >  NC_010473/3211732‑3212116                                                                                                                                                                                                           |                                                                                                                                                                                                     catTACGTTCTTAATACCGTAGCGGCTTAAGAAGAACGGGATGGTCAGAATGAACAGGGTTTCAGAGATCTGCGAAATCGACATGATGATTGACGC‑ATGCTGCACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATGCTCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACtg                                                                                                                                                                                                    >  1:14492S15/1‑200 (MQ=255)       gTTCTTAATACCGTAGCGGCTTAAGAAGAACGGGATGGTCAGAATGAACAGGGTTTCAGAGATCTGCGAAATCGACATGATGATTGACGC‑ATGCTGCACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAt                                                                                                                                                                                              >  1:8120S27/1‑200 (MQ=255)       gTTCTTAATACCGTAGCGGCTTAAGAAGAACGGGATGGTCAGAATGAACAGGGTTTC‑GAGATCTGCGAAATCGACATGATGATTGACGCCGTGCT‑CACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTGAGTAATGT‑CCGTT‑‑‑CGCCCAGCACTGATGAAT‑cccc                                                                                                                                                                                         >  1:29646S46/1‑200 (MQ=255)                       cGGCTTAAGAAGAACGGGATGGTCAGAATGAACAGGGTTTCAGAGATCTGCGAAATCGACATGATGATTGACGC‑ATGCTGCACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTa                                                                                                                                                                           <  1:18608S78/200‑1 (MQ=255)                            tAAGAAGAACGGGATGGTCAGAATGAACAGGGTTTCAGAGATCTGCGAAATCGACATGATGATTGACGC‑ATGCTGCACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCaaa                                                                                                                                                                      <  1:1489S17/200‑1 (MQ=255)                            tAAGAAGAACGGGATGGTCAGAATGAACAGGGTTTCAGAGATCTGCGAAATCGACATGATGATTGACGC‑ATGCTGCACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGCTATGACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCaaa                                                                                                                                                                      <  1:8693S65/200‑1 (MQ=255)                                aagaaCGGGATGGTCAGAATGAACAGGGTTTCAGAGATCTGCGGA‑TCGACATGATGATTGACGC‑ATGCTGCACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCAt                                                                                                                                                                 <  1:5921S7/200‑1 (MQ=255)                                     cGGGATGGTCAGAATGAACAGGGTTTCAGAGATCTGCGAAATCGACATGATGATTGACGC‑ATGCTGCACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCAttaa‑g                                                                                                                                                            <  1:11377S6/200‑1 (MQ=255)                                        gATGGTCAGAATGAACAGGGTTTCAGAGATCTGCGAAATCGACATGATGATTGACGC‑ATGCTGCACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCAttaa‑gtt‑a                                                                                                                                                        <  1:2281S52/200‑1 (MQ=40)                                         atcgTCAGAATGAACAGGGTT‑CAGAGATCTGCGAAATCGACATGATGATTGACGC‑ATGCTGCACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAATACCCTT‑A‑ATGATTTTTATCAAAATCAttaa‑gtt‑aa                                                                                                                                                       >  1:22093S45/4‑200 (MQ=255)                                            gTCAGAATGAACAGGGTTTCAGAGATCTGCGAAATCGACATGATGATTGACGC‑ATGCTGCACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGt                                                                                                                                                   >  1:30416S13/1‑200 (MQ=40)                                             tCAGAATGAACAGGGTTTCAGAGATCTGCGAAATCGACATGATGATTGACGC‑ATGCTGCACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCTGAGATGACTTTTATCAAAATCATTAA‑GTT‑AA‑gg                                                                                                                                                    >  1:5151S14/1‑200 (MQ=255)                                                gAATGAACAGGGTTTCAGAGATCTGCGAAATCGACATGATGATTGACGC‑ATGCTGCACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AAAGGTAGa                                                                                                                                                <  1:26261S17/200‑1 (MQ=40)                                                    gAACAGGGTTTCAGAGATCTGCGAAATCGACATGATGATTGACGC‑ATGCTGCACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATacac                                                                                                                                           <  1:12879S1/200‑1 (MQ=40)                                                    gAACAGGGTTTCAGAGATCTGCGAAATCGACATGATGATTGACGC‑ATGCTGCACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCC‑‑A‑ACGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATAcac‑a                                                                                                                                         <  1:30923S32/200‑1 (MQ=40)                                                    gAACAGGGTTTC‑GAGATCTGCGAAATCGACATGATGATTGACGC‑ATGCTGCACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATAcac‑a                                                                                                                                         >  1:10105S64/1‑200 (MQ=39)                                                      aCAGGGTTTCAGAGATCTGCGAAATCGACATGATGATTGACGC‑ATGCTG‑ACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCTTA‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACAC‑At                                                                                                                                        <  1:4928S112/200‑1 (MQ=39)                                                          ggTTTCAGAGATCTGCGAAATCGACATGATGATTGACGC‑ATGCTGCACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACAC‑ATCTTg                                                                                                                                    >  1:19439S29/1‑200 (MQ=39)                                                            ttcaagagATCTGCGAAATCGACATGATGATTGACGC‑ATGCTGCACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACAC‑ATCTTGTc                                                                                                                                  >  1:6173S40/5‑200 (MQ=39)                                                             ttCAGAGATCTGCGAAATCGACATGATGATTGACGC‑ATGCTGCACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCTGA‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACAC‑ATCTTGTc                                                                                                                                  <  1:19187S13/200‑1 (MQ=39)                                                               cgagaatgtGCGAAATCGACATGATGATTGACGC‑ATGCTGCACAATAAAGCTGTTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTCATGGA‑‑‑‑‑GT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACAC‑ATCTTGTCATATGAt                                                                                                                           >  1:6059S26/9‑200 (MQ=37)                                                                 gagaTCTGCGAAATCGACATGATGATTGACGC‑ATGCTGCACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGGACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACAC‑ATCTTGTCatatt                                                                                                                             <  1:32075S11/200‑2 (MQ=39)                                                                   gaTCTGCGAAATCGACATGATGATTGACGC‑ATGCTGCACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACAC‑ATCTTGTCATATGAt                                                                                                                           <  1:25963S27/200‑1 (MQ=39)                                                                                    tgatgaTTGACGC‑ATGCTGCACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACAC‑ATCTTGTCATATGATCAA‑ATG‑GTTTCGCCaaa                                                                                                        >  1:3617S11/1‑200 (MQ=38)                                                                                    tgatgaTTGACGC‑ATGCTGCACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCC‑‑A‑ACGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACAC‑ATCTTGTCATATGATCAA‑ATG‑GTTTCGCCaaaa                                                                                                       <  1:24726S70/200‑1 (MQ=38)                                                                                            gACGC‑ATGCTGCACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACAC‑ATCTTGTCATATGATCAAGTTA‑CTTTTGCCAAAAATCaat                                                                                                 <  1:26512S27/200‑1 (MQ=37)                                                                                                   tgctgcACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACAC‑ATCTTGTCATATGATCAA‑ATG‑GTTTCGCCAAAAATCAATAATCAGa                                                                                          >  1:20246S8/1‑200 (MQ=37)                                                                                                        cacaATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACAC‑ATCTTGTCATATGATCAA‑ATG‑GTTTCGCCAAAAATCAATAATCAGacaaca                                                                                     <  1:30403S77/200‑1 (MQ=35)                                                                                                              aaaGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACAC‑ATCTTGTCATATGATCAA‑ATG‑GTTTCGCCAAAAATCAATAATCAGACAACAAAAtgt                                                                               <  1:28682S38/200‑1 (MQ=35)                                                                                                               aaGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACATGTCGTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTCATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑GA‑GGTAGATACAC‑ATCTTGTCATATGATCAA‑ATG‑GTTTCGCCAAAAATCAATAATCAGACAACAAAAt                                                                                 <  1:20063S39/200‑1 (MQ=21)                                                                                                                               tgggattcttGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACAC‑ATCTTGTCATATGATCAA‑ATG‑GTTTCGCCAAAAATCAATAATCAGACAACAAAATGTGCGAACTCGATATTTTa                                                              >  1:18850S2/9‑200 (MQ=18)                                                                                                                               aatcaatatttctgAAGCTGTCAAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTCCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGACTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACAC‑ATCTTGTCATATGATCAA‑ATG‑GTTTCGCCAAAAATCAATAATCAGACAACAAAATGTGCGAACTCGATATTTTa                                                              >  1:26458S1/14‑200 (MQ=17)                                                                                                                                cGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACAC‑ATCTTGTCATATGATCAA‑ATG‑GTTTCGCCAAAAATCAATAATCAGACAACAAAATGTGCGAACTCGATATTTTac                                                             >  1:2391S17/1‑200 (MQ=34)                                                                                                                                         gTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACAC‑ATCTTGTCATATGATCAA‑ATG‑GTTTCGCCAAAAATCAATAATCAGACAACAAAATGTGCGAACTCGATATTTTACACGActctc                                                    >  1:21205S49/1‑200 (MQ=33)                                                                                                                                               gCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACAC‑ATCTTGTCATATGATCAA‑ATG‑GTTTCGCCAAAAATCAATAATCAGACAACAAAATGTGCGAACTCGATATTTTACACGACTCTCTTTAcc                                              >  1:23732S27/1‑200 (MQ=33)                                                                                                                                                         aaGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACAC‑ATCTTGTCATATGATCAA‑ATG‑GTTTCGCCAAAAATCAATAATCAGACAACAAAATGTGCGAACTCGATATTTTACACTACT‑TCTTTACCAATTCTGcccc                                   <  1:5157S6/200‑1 (MQ=17)                                                                                                                                                                  ccGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACAC‑ATCTTGTCATATGATCAA‑ATGAGTTTCGCCAAAAATCAATAATCAGACAACAAAATGTGCGA‑CTC‑ATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTacac                          <  1:3616S4/200‑1 (MQ=17)                                                                                                                                                                         t‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAAAGTTTAA‑GGTAGATACAC‑ATCTTGTCATATGATCAA‑ATG‑GTTTCGCCAAAAATCAATAATCAGACAACAAAATGTGCGAACTCGATATTTTACACGACTCTTTTTACCAATTCTGCCCCGAATTACACTTaa                      >  1:11339S109/1‑200 (MQ=14)                                                                                                                                                                               tG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACAC‑ATCTTGTCATATGATCAA‑ATG‑GTTTCGCCAAAAATCAATAATCAGACAACAAAATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGa                 <  1:16105S13/200‑1 (MQ=31)                                                                                                                                                                                   tAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACAC‑ATCTTGTCATATGATCAA‑ATG‑GTTTCGCCAAAAATCAATAATCAGACAACAAAATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTc              >  1:10287S15/1‑200 (MQ=31)                                                                                                                                                                                         gCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACAC‑ATCTTGTCATATGATCAA‑ATG‑GTTTCGCCAAAAATCAATAATCAGACAACAAAATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGc        >  1:12070S15/1‑200 (MQ=11)                                                                                                                                                                                           aGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACAC‑ATCTTGTCATATGATCAA‑ATG‑GTTTCGCCAAAAATCAATAATCAGACAACAAAATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCtt      >  1:19147S28/1‑200 (MQ=11)                                                                                                                                                                                             ttCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACACTAT‑TTGTCATATGATCAA‑ATG‑GTTTCGCCAAAAATCAATAATCAGACAACAAAATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTaa    >  1:8808S19/1‑200 (MQ=11)                                                                                                                                                                                               ccGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACAC‑ATCTTGTCATATGATCAA‑ATG‑GTTTCGCCAAAAATCAATAATCAGACAACAAAATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACg  <  1:22715S2/200‑1 (MQ=11)                                                                                                                                                                                                           |                                                                                                                                                                                                     CATTACGTTCTTAATACCGTAGCGGCTTAAGAAGAACGGGATGGTCAGAATGAACAGGGTTTCAGAGATCTGCGAAATCGACATGATGATTGACGC‑ATGCTGCACAATAAAGCTGCTGGCAAACATCGGATCTTTGTCGAAGCTGTGCAGGAAGGTATTACCGAACAT‑‑‑GTTG‑GTAATCTGCAGTTCCGCGCCCAGCACTGATGAAT‑CCCCT‑A‑ATGATTTTTATCAAAATCATTAA‑GTT‑AA‑GGTAGATACAC‑ATCTTGTCATATGATCAA‑ATG‑GTTTCGCCAAAAATCAATAATCAGACAACAAAATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACG  >  NC_010473/3211732‑3212116

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 49 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.