New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_010473	= 285525	67 (1.750)	41 (1.080)	35/394	0.2	38.2%	coding (538/543 nt)	ecpR	ECP biosynthesis operon DNA‑binding transcriptional regulator EcpR
	?	NC_010473	= 321143	NA (NA)					pseudogene (264/264 nt)	ECDH10B_RS23575	acetyltransferase

AAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGC‑AAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCAC‑GGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGAAGGTT‑GGGAATAA  >  NC_010473/320949‑321342                                                                                                                                                                                                        |                                                                                                                                                                                                                aaGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGC‑AAAGAACCTTGCAGAGGCGTTCGAGCGTTCTGACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCAC‑GGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATAT‑‑GGGGCAA‑ATCCA‑ATTa                                                                                                                                                                                                          >  1:13923S23/1‑200 (MQ=11)       gACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGC‑AAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCAC‑GGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTAt                                                                                                                                                                                                     <  1:512S21/200‑1 (MQ=11)         cTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGC‑AAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCAC‑GGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCa                                                                                                                                                                                                   >  1:15384S8/1‑200 (MQ=11)                    tCATGCCCAAACCAGACGGGTTAACGGCAGC‑AAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCAC‑GGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTgcg                                                                                                                                                                                        <  1:3689S21/200‑1 (MQ=31)                     cATGCCCAAACCAGACGGGTTAACGGCAGC‑AAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCAC‑GGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTgcgc                                                                                                                                                                                       <  1:3921S3/200‑1 (MQ=31)                                 aGACGGGTTAACGGCAGC‑AAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCAC‑GGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCg                                                                                                                                                                         <  1:31135S7/200‑1 (MQ=32)                                   aCGGGTTAACGGCAGC‑AAAGAACCTTGCAGAGGCGTTCGAGC‑GTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCAC‑GGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGAc                                                                                                                                                                      >  1:11349S3/1‑200 (MQ=17)                                        ttAACGGCAGC‑AAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCAC‑GGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTg                                                                                                                                                                  <  1:6513S4/200‑1 (MQ=32)                                         tAACGGCAGCGAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCT‑‑‑CAC‑GGCAA‑ATCTGCGGCAGCGC‑TTTGTAATGGGTTAAG‑‑‑TAACAAA‑‑TCTGGAA‑ATATA‑GGG‑CAA‑ATC‑A‑ATTACCTATCAGGCAGTTTGCGCCAGAATCACTACCGGACCCTGAATAACGGCa                                                                                                                                                        >  1:22284S136/1‑200 (MQ=12)                                               cagc‑aAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCAC‑GGGGATA‑CTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACgg                                                                                                                                                          <  1:23822S3/200‑1 (MQ=18)                                                          ccTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCAC‑GGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGAc                                                                                                                                                 >  1:5210S11/1‑200 (MQ=33)                                                                  agGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCACTCGCCACAGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑g                                                                                                                                         >  1:21682S19/1‑200 (MQ=21)                                                                         cGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCAC‑GGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTT‑‑CGTC‑‑A‑TCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCgcgc                                                                                                                              <  1:2689S32/200‑1 (MQ=18)                                                                              aTTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCAC‑GGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCg                                                                                                                            >  1:1139S38/1‑200 (MQ=35)                                                                              aTTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCAC‑GGGAATATCTGCGGCAGCGGGCTGTTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATAAGGGGCAA‑ATGCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGcc                                                                                                                             >  1:14167S110/1‑200 (MQ=21)                                                                               ttATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCAC‑GGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGa                                                                                                                           <  1:292S171/200‑1 (MQ=35)                                                                                             aTCCGCATAGTGCGCTGGGTTATCGCTCGCCAC‑GGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCt                                                                                                            >  1:29146S24/1‑200 (MQ=35)                                                                                                    tAGTGCGCTGGGTTATCGCTCGCCAC‑AGGA‑‑ATGTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTTTCACCTGC‑AGTTtc                                                                                                   >  1:29546S20/1‑200 (MQ=37)                                                                                                             gggTTATCGCTCGCCAC‑GGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCaataa                                                                                           <  1:31494S48/200‑1 (MQ=38)                                                                                                               gTTATCGCTCGCCAC‑GGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATAT‑‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTa                                                                                        >  1:20622S116/1‑200 (MQ=38)                                                                                                                      ctcgcCAC‑GGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCGATCAGGTAGTTTGCGCC‑‑AATCACTACCGGACCCTGAACAACGGTACCATGACAAATAC‑GG‑TATTCGCGCCGATAACAACTT‑CACCTGCCAGGTTCATCAATAATTACCTG‑Gt                                                                                 <  1:17605S1/200‑1 (MQ=25)                                                                                                                          ccAC‑GGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGc                                                                             <  1:7059S53/200‑1 (MQ=38)                                                                                                                                  aaTATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATC‑CAGGCAA‑GTC‑A‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGaa                                                                     >  1:22399S23/1‑200 (MQ=38)                                                                                                                                   atatCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGaa                                                                     <  1:1153S58/200‑1 (MQ=39)                                                                                                                                   atatCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATAT‑‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGAat                                                                    >  1:15271S4/1‑200 (MQ=39)                                                                                                                                       tgcgggCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGAATAtt                                                                 >  1:11383S23/5‑200 (MQ=39)                                                                                                                                         gCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATAT‑‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGAATAttttt                                                              >  1:10419S24/1‑200 (MQ=39)                                                                                                                                             cAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCGA‑ATTACCTATCAGGCAGTTGTCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATACCGGGTATTGGCACAGATAACGACTT‑CACATGC‑AGCTT‑ATCAATAATTGCCTG‑GTCTGCAATCTGAATATTTTtctc                                                           >  1:23511S7/1‑200 (MQ=25)                                                                                                                                              aGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGAATATTTTTctct                                                          >  1:19041S6/1‑200 (MQ=40)                                                                                                                                               gCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGAATATTTTTCTCtt                                                         >  1:3548S37/1‑200 (MQ=40)                                                                                                                                                cGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGAATATTTTTCTCttt                                                        <  1:25755S11/200‑1 (MQ=40)                                                                                                                                                 ggcttgttgaTGGGTTAAGTGATAACAGATGTCTGGAAGATGTC‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATAGCAAACAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATCATTGCCTGAGTATACAATCTGAATATTTT‑CTCttt                                                        >  1:854S6/10‑200 (MQ=255)                                                                                                                                                     ttGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACC‑‑‑AATAATGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGAATATTTTTCTCTTTAACATTaa                                                <  1:24163S53/200‑1 (MQ=39)                                                                                                                                                      tGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCGA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGAGCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGAATATTTTTCTCTTTAACAtt                                                  <  1:16100S215/200‑1 (MQ=40)                                                                                                                                                             ggTTAAGTGATAAC‑GATGTCTGGAA‑ATATC‑AGGGCAG‑AT‑‑A‑AATACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGa                                        >  1:15004S2/1‑200 (MQ=255)                                                                                                                                                               ttAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGAATTTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAg                                         <  1:27060S12/200‑1 (MQ=255)                                                                                                                                                                  aGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAAGATT‑G‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATa                                      <  1:16495S12/200‑1 (MQ=255)                                                                                                                                                                     gATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGtt                                   <  1:22621S29/200‑1 (MQ=255)                                                                                                                                                                       tAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGtttt                                 <  1:19872S53/200‑1 (MQ=255)                                                                                                                                                                        aaCAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGttttt                                >  1:27771S18/1‑200 (MQ=255)                                                                                                                                                                        aaCAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGttttt                                <  1:15401S22/200‑1 (MQ=255)                                                                                                                                                                         aCAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTc                               <  1:24923S127/200‑1 (MQ=255)                                                                                                                                                                                tCTGGAA‑ATATA‑GGGGCAA‑GTCCACATTACCTATCAGGCAGTTTGCGCC‑‑AATTACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTcc                         <  1:19014S11/200‑1 (MQ=255)                                                                                                                                                                                 cTGGAA‑ATAT‑‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTT‑CAGTTCCtgtg                     >  1:23365S17/1‑200 (MQ=255)                                                                                                                                                                                   ggAA‑ATATC‑CGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGAATATTT‑‑‑TCTG‑ACGTTTGAGCTTCAGATAGTTTTTCA‑TTCCTGTGACAGa                >  1:30354S115/1‑200 (MQ=255)                                                                                                                                                                                            a‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGAAgg             <  1:12864S2/200‑1 (MQ=255)                                                                                                                                                                                              ggggCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGAAGGt            >  1:5362S72/1‑200 (MQ=255)                                                                                                                                                                                               gggCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGAAGGtt           >  1:14436S3/1‑200 (MQ=255)                                                                                                                                                                                                  cAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACT‑‑CGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGAATATTTTTCTCT‑‑AACATTAAGCTTCAGATAGTTTCTCAGTTCCTGTGACAGAAGGTTTGGGAAt    >  1:8970S33/1‑200 (MQ=255)                                                                                                                                                                                                        ccA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGAAGGTT‑GGGAATaa  <  1:23371S39/200‑1 (MQ=255)                                                                                                                                                                                                        |                                                                                                                                                                                                                AAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGC‑AAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCAC‑GGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAA‑ATATA‑GGGGCAA‑ATCCA‑ATTACCTATCAGGCAGTTTGCGCC‑‑AATCACTACCGGACCCTGAATAACGGCACCATGACAAATAC‑GGGTATTCGCGCCGATAACAACTT‑CACCTGC‑AGTTTCATCAATAATTACCTG‑GTCTGCAATCTGAATATTTTTCTCTTTAACATTAAGCTTCAGATAGTTTTTCAGTTCCTGTGACAGAAGGTT‑GGGAATAA  >  NC_010473/320949‑321342

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 50 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.