New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_010473	= 262025	33 (0.860)	46 (1.220)	43/392	0.1	59.2%	pseudogene (1/294 nt)	xynR	DNA‑binding transcriptional repressor XynR
	?	NC_010473	263472 =	31 (0.820)					pseudogene (465/468 nt)	xynR	DNA‑binding transcriptional repressor XynR

CCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTT‑G‑GGG‑TC‑AGTA‑CAC‑AGCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACAGCTCCGTC  >  NC_010473/263276‑263670                                                                                                                                                                                                           |                                                                                                                                                                                                        ccTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTT‑G‑GGG‑TC‑AGTA‑CAC‑AGCAgg                                                                                                                                                                                                      >  1:32110S12/1‑200 (MQ=11)    tAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTT‑G‑GGG‑TC‑AGTA‑CAC‑AGCAGGGCg                                                                                                                                                                                                   <  1:18716S12/200‑1 (MQ=11)      agcgtcgacaggctcagggcggcgatgacgcgggactcgtggttccacaccggcaccgccacgcagcgcacgccctgctcgttctcttcgctgtccagggcgtagccttgctcgcgggtctgcgccagggcgctcattaaggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagcag                                                                                                                                                                                                       <  1:30858S46‑M2/3‑1 (MQ=255)         gtcgacaggctcagggcggcgatgacgcgggactcgtggttccacaccggcaccgccacgcagcgcacgccctgctcgttctcttcgctgtccagggcgtagccttgctcgcgggtctgcgccagggcgctcattaaggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGc                                                                                                                                                                                                    <  1:22647S7‑M2/6‑1 (MQ=255)          cGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTT‑G‑GGG‑GCTAGTA‑CAC‑AGCAGGGCGTTCAg                                                                                                                                                                                              <  1:22935S10/200‑1 (MQ=11)               aggctcagggcggcgatgacgcgggactcgtggttccacaccggcaccgccacgcagcgcacgccctgctcgttctcttcgctgtccagggcgtagccttgctcgcgggtctgcgccagggcgctcattaaggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAg                                                                                                                                                                                              <  1:3083S36‑M2/12‑1 (MQ=255)                       ggcggcgatgacgcgggactcgtggttccacaccggcaccgccacgcagcgcacgccctgctcgttctcttcgctgtccagggcgtagccttgctcgcgggtctgcgccagggcgctcattaaggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCt                                                                                                                                                                                      >  1:23616S17‑M2/181‑200 (MQ=255)                       ggcggcgatgacgcgggactcgtggttccacaccggcaccgccacgcagcgcacgccctgctcgttctcttcgctgtccagggcgtagccttgctcgcgggtctgcgccagggcgctcattaaggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCt                                                                                                                                                                                      <  1:9374S33‑M2/20‑1 (MQ=255)                           gatgaGTTCAGTAATATAAGCGAACTGAAGGATG‑T‑CTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTT‑G‑GGG‑TC‑AGTA‑CAC‑AGCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAgg                                                                                                                                                                          >  1:20336S79/1‑200 (MQ=17)                            cgatgacgcgggactcgtggttccacaccggcaccgccacgcagcgcacgccctgctcgttctcttcgctgtccagggcgtagccttgctcgcgggtctgcgccagggcgctcattaaggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGccc                                                                                                                                                                                 >  1:28946S17‑M2/176‑200 (MQ=255)                              gaGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTT‑G‑GGG‑TC‑AGTA‑CAC‑AGCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGc                                                                                                                                                                         <  1:7236S37/200‑1 (MQ=32)                                gTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTT‑G‑GGG‑TC‑AGTA‑CAC‑AGCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCaa                                                                                                                                                                       <  1:28544S78/200‑1 (MQ=32)                                acgcgggactcgtggttccacaccggcaccgccacgcagcgcacgccctgctcgttctcttcgctgtccagggcgtagccttgctcgcgggtctgcgccagggcgctcattaaggcttcgcgagacgcgagggtgggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCccagcc                                                                                                                                                                             >  1:10012S10‑M2/172‑200 (MQ=255)                                 acgcgggactcgtggttccacaccggcaccgccacgcagcgcacgccctgctcgttctcttcgctgtccagggcgtagccttgctcgcgggtctgcgccagggcgctcattaaggcttcgcgagacgcgagggtggcgggcgtaaaggtagcgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCccagcca                                                                                                                                                                            <  1:22275S124‑M2/30‑1 (MQ=255)                                      tAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTT‑GCGGG‑TC‑AGTA‑CAC‑AGCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAac                                                                                                                                                                  <  1:618S20/200‑1 (MQ=17)                                       gcaggtcgcatacacaccggcaccgccacgcagcgcacgccctgctcgttctcttcgctgtccagggcgtagccttgctcgcgggtctgcgccagggcgctcattaaggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAAt                                                                                                                                                                      >  1:7703S1‑M2/165‑200 (MQ=255)                                             tggttccacaccggcaccgccacgcagcgcacgccctgctcgttctcttcgctgtccagggcgtagccttgctcgcgggtctgcgccagggcgctcattaaggcttcgcgagacgcgagggtggcgggcgtaagggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAacac                                                                                                                                                                >  1:2353S1‑M2/159‑200 (MQ=255)                                                gAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTG‑CCAACTTTTT‑G‑GGG‑TC‑AGTA‑CAC‑AGCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATg                                                                                                                                                      >  1:12089S105/1‑200 (MQ=18)                                                        ggATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTT‑G‑GGG‑TC‑AGTA‑CAC‑AGCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTgg                                                                                                                                               <  1:15493S43/200‑1 (MQ=34)                                                               gccacgcagcgcacgccctgctcgttctcttcgctgtccagggcgtagccttgctcgcgggtctgcgccagggcgctcattaaggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGc                                                                                                                                              <  1:390S3‑M2/60‑1 (MQ=255)                                                               gccacgcagcgcacgccctgctcgttctcttcgctgtccagggcgtagccttgctcgcgggtctgcgccagggcgctcattaaggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGc                                                                                                                                              >  1:12800S53‑M2/141‑200 (MQ=255)                                                                ttACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTT‑G‑GGG‑TC‑AGTA‑CACCAGCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCAc                                                                                                                                        >  1:3640S154/1‑200 (MQ=21)                                                                  acgcagcgcacgccctgctcgttctcttcgctgtccagggcgtagccttgctcgcgggtctgcgccagggcgctcattaaggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTg                                                                                                                                           >  1:30017S35‑M2/138‑200 (MQ=255)                                                                     cagcgcacgccctgctcgttctcttcgctgtccagggcgtagccttgctcgcgggtctgcgccagggcgctcattaaggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCAc                                                                                                                                        <  1:21362S38‑M2/66‑1 (MQ=255)                                                                        tatatTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTT‑G‑GGGGTC‑AGTA‑CAC‑AGCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑Aggc                                                                                                                               <  1:20328S12/200‑1 (MQ=25)                                                                         gcacgccctgctcgttctcttcgctgtccagggcgtagccttgctcgcgggtctgcgccagggcgctcattaaggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGc                                                                                                                                    <  1:27271S97‑M2/70‑1 (MQ=255)                                                                               cctgctcgttctcttcgctgtccagggcgtagccttgctcgcgggtctgcgccagggcgctcattaaggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑Aggcgg                                                                                                                             <  1:4896S9‑M2/76‑1 (MQ=255)                                                                                     cgttctcttcgctgtccagggcgtagccttgctcgcgggtctgcgccagggcgctcattaaggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCg                                                                                                                       <  1:23976S41‑M2/82‑1 (MQ=255)                                                                                         ctcttcgctgtccagggcgtagccttgctcgcgggtctgcgccagggcgctcattaaggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGAtgt                                                                                                                   >  1:14598S27‑M2/115‑199 (MQ=255)                                                                                         ctcttcgctgtccagggcgtagccttgctcgcgggtctgcgccagggcgctcattaaggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGc                                                                                                                   >  1:1799S17‑M2/115‑200 (MQ=255)                                                                                           gcagAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTT‑G‑GGG‑TC‑AGTA‑CAC‑AGCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAg                                                                                                           <  1:29905S7/200‑1 (MQ=37)                                                                                            gttctcttcgctgtccagggcgtagccttgctcgcggtccagggcgctcgttaaggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTg                                                                                                                >  1:19596S5‑M2/112‑200 (MQ=255)                                                                                              cgctgtccagggcgtagccttgctcgcgggtctgcgccagggcgctcattaaggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGaa                                                                                                              <  1:2348S11‑M2/91‑1 (MQ=255)                                                                                                agaaTTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTT‑G‑GGG‑TC‑AGTA‑CAC‑AGCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCAC‑GGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATg                                                                                                     >  1:4119S3/1‑200 (MQ=37)                                                                                                       gCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTT‑G‑GGG‑TC‑AGTA‑CAC‑AGCAGGGCGTTGAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGcc                                                                                               >  1:6509S15/1‑200 (MQ=37)                                                                                                        ggcgtagccttgctcgcgggtctgcgccagggcgctcattaaggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATgg                                                                                                    <  1:25288S48‑M2/101‑1 (MQ=255)                                                                                                        ccTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTT‑G‑GGG‑TC‑AGTA‑CAC‑AGCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCa                                                                                              <  1:31712S10/200‑1 (MQ=38)                                                                                                           gtagccttgctcgcgggtctgcgccagggcgctcattaaggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑A‑‑‑GGCGGCCGATGCGTGAATAGGCGATGGCGGCCa                                                                                              >  1:10504S11‑M2/97‑200 (MQ=255)                                                                                                             aaTTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTT‑G‑GGG‑TC‑AGTA‑CAC‑AGCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTg                                                                                         <  1:13079S16/200‑1 (MQ=38)                                                                                                               ccttgctcgcgggtctgcgccagggcgctcattaaggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAg                                                                                             >  1:21788S76‑M2/93‑200 (MQ=255)                                                                                                                 ttgctcgcgggtctgcgccagggcgctcattaaggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCt                                                                                           >  1:19055S49‑M2/91‑200 (MQ=255)                                                                                                                   aaGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTT‑G‑GGG‑TC‑AGTA‑CAC‑AGCAGGGCGTTCAGCT‑GGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCaa                                                                                  >  1:1140S15/1‑200 (MQ=38)                                                                                                                      cgcgggtctgcgccagggcgctcattaaggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCt                                                                                      <  1:15229S5‑M2/115‑1 (MQ=255)                                                                                                                       tCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCA‑CTTTTT‑G‑G‑‑‑TC‑‑GTA‑CAC‑AGCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTtctc                                                                           <  1:23447S48/200‑1 (MQ=38)                                                                                                                        cTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTT‑G‑GGG‑TC‑AGTA‑CAC‑AGCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAAtctt                                                                              <  1:10473S54/200‑1 (MQ=39)                                                                                                                         tatctctaaTTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTT‑G‑GGG‑TC‑AGTA‑CAC‑AGCAGGGCGTTCAGCTTGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAAtcttc                                                                             <  1:15190S9/193‑1 (MQ=38)                                                                                                                          gACTCCAATTGAATATCGGAATCAGACTGATATGCCTCGTGTTTAACTGTCCAACTTTTT‑G‑GG‑‑TC‑AGTA‑CAC‑AGCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTtctc                                                                           <  1:18102S9/200‑1 (MQ=39)                                                                                                                            cTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTT‑G‑GGG‑TC‑AGTA‑CAC‑AGCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCg                                                                          <  1:5790S18/200‑1 (MQ=39)                                                                                                                             tCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTT‑G‑GGG‑TC‑AGTA‑CAC‑AGCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGa                                                                         >  1:22299S53/1‑200 (MQ=39)                                                                                                                                   cagggcgctcattaaggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGa                                                                         <  1:16752S76‑M2/128‑1 (MQ=255)                                                                                                                                    ggcgctcattaaggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCGATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGat                                                                        >  1:27749S7‑M2/72‑200 (MQ=255)                                                                                                                                    gAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTT‑G‑GGG‑TC‑AGTA‑CAC‑AGCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGAc                                                                  >  1:2035S24/1‑200 (MQ=39)                                                                                                                                       gcgctcattaaggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGAtata                                                                     >  1:13817S17‑M2/69‑200 (MQ=255)                                                                                                                                        gggagaattgaaCCTATATGCCTCGTGTTTAACTGTCCAACTTTTT‑G‑GGG‑TC‑AGTA‑CAC‑AGCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGatatcttcacgc                                                              <  1:11882S150/189‑9 (MQ=39)                                                                                                                                         taggaaataGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTT‑G‑GGG‑TC‑AGTA‑CAC‑AGCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTCGCCTTCAATCTTCTCGATATAGACCCCtt                                                             >  1:17705S27/9‑200 (MQ=40)                                                                                                                                         tCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTT‑G‑GGG‑TC‑AGTA‑CAC‑AGCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCtt                                                             >  1:13916S89/1‑200 (MQ=40)                                                                                                                                                aaggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTc                                                            <  1:10647S8‑M2/141‑1 (MQ=255)                                                                                                                                                 aggcttcgcgagacgcgagggtggcgggcgtaaaggtagtgtactcatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCa                                                           <  1:26913S3‑M2/142‑1 (MQ=255)                                                                                                                                                   aCCTATATGCCTCGTGTTTAACTGTCCAACTTTTTCG‑GGG‑TC‑AGTA‑CAC‑AGCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGt                                                    >  1:31682S3/1‑200 (MQ=255)                                                                                                                                                    ccTATATGCCTCGTGTTTAACTGTCCAACTTTTT‑G‑GGG‑TC‑AGAAACAC‑AGCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTc                                                   <  1:545S72/200‑1 (MQ=255)                                                                                                                                                      tcgcgagacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGccc                                                      >  1:15174S19‑M2/54‑200 (MQ=255)                                                                                                                                                            gacgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAg                                                >  1:32321S3‑M2/48‑200 (MQ=255)                                                                                                                                                             acgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGT‑‑A‑‑GGCAAAGCAGATAGAGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATc                                            >  1:9464S80‑M2/47‑200 (MQ=255)                                                                                                                                                              cgcgagggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGa                                              <  1:31133S20‑M2/155‑1 (MQ=255)                                                                                                                                                                   tttAACTGTCCAACTTTTT‑G‑GGG‑TC‑AGTA‑CAC‑AGCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCGA‑‑TAC‑CGATAT‑GACCC‑‑TCACGCCCGTCCAGGATCCCCAGATGGGTGGTc                             >  1:9731S3/1‑200 (MQ=255)                                                                                                                                                                   gggtggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATcccc                                         >  1:29055S24‑M2/41‑200 (MQ=255)                                                                                                                                                                       ggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGAt                                     <  1:21809S25‑M2/164‑1 (MQ=255)                                                                                                                                                                       ggcgggcgtaaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGAt                                     >  1:28231S11‑M2/37‑200 (MQ=255)                                                                                                                                                                              aaCTTTTT‑G‑GGG‑TC‑AGTA‑CAC‑AGCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGccc                        >  1:19412S68/1‑200 (MQ=255)                                                                                                                                                                                aaaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCt                            <  1:16567S22‑M2/173‑1 (MQ=255)                                                                                                                                                                                 aaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTg                           <  1:8547S122‑M2/174‑1 (MQ=255)                                                                                                                                                                                 aaggtagtgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCCATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTg                           <  1:3223S200‑M2/174‑1 (MQ=255)                                                                                                                                                                                        tgtactgatagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTc                    <  1:30557S10‑M2/181‑1 (MQ=255)                                                                                                                                                                                                tagccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGa            <  1:3636S17‑M2/189‑1 (MQ=255)                                                                                                                                                                                                 agccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGAc           <  1:18641S22‑M2/190‑1 (MQ=255)                                                                                                                                                                                                   ccctccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACAg         <  1:3441S13‑M2/192‑1 (MQ=255)                                                                                                                                                                                                      tccagCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCGATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGACCTGCCCGGTCCGCCGGGACAGCTc      >  1:25671S42‑M2/6‑200 (MQ=255)                                                                                                                                                                                                          gcagGGCGTTGAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACAGCTCCGTc  >  1:11774S142/1‑200 (MQ=255)                                                                                                                                                                                                           |                                                                                                                                                                                                        CCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTT‑G‑GGG‑TC‑AGTA‑CAC‑AGCAGGGCGTTCAGCTCGGCCTCGCCCAGCCAGGCAATCAACACCTTGCCGATGGCGGTGGCGTGCACCGGC‑AGGCGGCGGCCGATGCGTGAATAGGCGATGGCGGCCAGCTTGCCTTCAATCTTCTCGATATAGACCCCTTCACGCCCGTCCAGGATCCCCAGATGGGTGGTCTGCCCGGTCCGCCGGGACAGCTCCGTC  >  NC_010473/263276‑263670

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 50 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.