New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_010473	= 262025	33 (0.860)	46 (1.220)	43/392	0.1	59.2%	pseudogene (1/294 nt)	xynR	DNA‑binding transcriptional repressor XynR
	?	NC_010473	263472 =	31 (0.820)					pseudogene (465/468 nt)	xynR	DNA‑binding transcriptional repressor XynR

AGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACGA‑‑‑TGAAATGGAATAGCCCC‑TAATATGTCAAA‑GCC‑AAAA‑TACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTC‑GGCACGTTTTG‑GTGTCCCCCGAACCCAGGTCAGGACATGGGTTGCCCTCTATGAAAAACATG  >  NC_010473/261829‑262220                                                                                                                                                                                                              |                                                                                                                                                                                                              aGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcag                                                                                                                                                                                                            <  1:30858S46‑M1/200‑4 (MQ=255)    gTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggc                                                                                                                                                                                                         <  1:22647S7‑M1/200‑7 (MQ=255)          aGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcag                                                                                                                                                                                                   <  1:3083S36‑M1/200‑13 (MQ=255)                  ggcggcGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcct                                                                                                                                                                                           >  1:23616S17‑M1/1‑180 (MQ=255)                  ggcggcGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcct                                                                                                                                                                                           <  1:9374S33‑M1/200‑21 (MQ=255)                    cggcgATGACACGGAGCTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑gg                                                                                                                                                                                        >  1:19412S60/1‑200 (MQ=255)                      gtggtgatgacgcggcagTGGTTTCATACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGAc                                                                                                                                                                                      <  1:4085S7/183‑1 (MQ=255)                       cgATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgccc                                                                                                                                                                                      >  1:28946S17‑M1/1‑175 (MQ=255)                           gACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCGCTCTCATTTACAGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACTCGATAGCA‑‑‑TCCAGTGTACTGCACCCATTTTGTT‑GGAcaa                                                                                                                                                                                    >  1:600S13/1‑198 (MQ=255)                            aCGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGTGGGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagcc                                                                                                                                                                                  >  1:10012S10‑M1/1‑171 (MQ=255)                            aCGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGCGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagcca                                                                                                                                                                                 <  1:22275S124‑M1/200‑31 (MQ=255)                               cgGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACGA‑‑‑TGAAATg                                                                                                                                                                          <  1:7587S7/200‑1 (MQ=255)                                  gcaggtcgcatacacaccggcaccgccaCGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaat                                                                                                                                                                           >  1:7703S1‑M1/13‑164 (MQ=255)                                        tGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAGGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacac                                                                                                                                                                     >  1:2353S1‑M1/1‑158 (MQ=255)                                        gtgaccgcacccGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACGA‑‑‑TGAAATGGAATAGccc                                                                                                                                                                 >  1:25669S55/11‑200 (MQ=255)                                           ttCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTTTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACGA‑‑‑TGAAATGGAATAGCCCC‑Ta                                                                                                                                                             >  1:11774S134/1‑200 (MQ=40)                                            tCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACGA‑‑‑TGAAATGGAATAGCCCC‑Taa                                                                                                                                                            >  1:32110S5/1‑200 (MQ=40)                                                    ggCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGGCTTCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACGA‑‑‑TGAAATGGAATAGCCCC‑TAATATGTc                                                                                                                                                      <  1:18716S19/200‑1 (MQ=39)                                                          gCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggc                                                                                                                                                   <  1:390S3‑M1/200‑61 (MQ=255)                                                          gCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggc                                                                                                                                                   >  1:12800S53‑M1/1‑140 (MQ=255)                                                             aCGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtg                                                                                                                                                >  1:30017S35‑M1/1‑137 (MQ=255)                                                                cAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcac                                                                                                                                             <  1:21362S38‑M1/200‑67 (MQ=255)                                                                  gcgcACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACGA‑‑‑TGAAATGGAATAGCCCC‑TAATATGTCAAA‑GCC‑AAAA‑TACCCt                                                                                                                                   >  1:31879S31/1‑200 (MQ=39)                                                                    gcACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggc                                                                                                                                         <  1:27271S97‑M1/200‑71 (MQ=255)                                                                         cccTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACCA‑‑‑TGAAATGGAATAGCCCC‑TAATATGTCAAA‑GCC‑AAAA‑TACCCTTTTGaaa                                                                                                                            <  1:7236S44/200‑1 (MQ=39)                                                                          ccTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcgg                                                                                                                                   <  1:4896S9‑M1/200‑77 (MQ=255)                                                                           cTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATT‑‑‑TT‑GGACGA‑‑‑TGAAATGGAATAGCCCC‑TAATATGTCAAA‑GCC‑AAAA‑TACCCTTTTGAAAAgcgc                                                                                                                       <  1:28544S85/200‑1 (MQ=38)                                                                            tGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACGA‑‑‑TGAAATGGAATAGCCCC‑TAATATGTCAAA‑GCC‑AAAA‑TACCCTTTTGAAAAgc                                                                                                                         >  1:20336S72/1‑200 (MQ=38)                                                                            tGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑‑TCGAT‑GAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACGA‑‑‑TGAAATGGAATAGCCCC‑TAATATGTCAAA‑GCC‑AAAA‑TACCCTTTTGAAAAgcg                                                                                                                        <  1:618S27/200‑1 (MQ=37)                                                                                cGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccg                                                                                                                             <  1:23976S41‑M1/200‑83 (MQ=255)                                                                                 gTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGG‑‑‑‑‑T‑‑‑CCAGGGCG‑‑CTCGTT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccgatgcgtg                                                                                                                      >  1:19596S5‑M1/1‑111 (MQ=255)                                                                                    ctctTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccgatgt                                                                                                                         >  1:14598S27‑M1/1‑114 (MQ=255)                                                                                    ctctTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccgatgc                                                                                                                         >  1:1799S17‑M1/1‑114 (MQ=255)                                                                                         cGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccgatgcgtgaa                                                                                                                    <  1:2348S11‑M1/200‑92 (MQ=255)                                                                                          gCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACGA‑‑‑TGAAATGGAATAGCCCC‑TAATATGTCAAA‑GCC‑AAAA‑TACCCTTTTGAAAAGCGCCTTGAAGTCGTg                                                                                                           >  1:12089S98/1‑200 (MQ=37)                                                                                          gCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCCTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACGA‑‑‑TGAAATGGAATAGCCC‑‑TAATATGTCAA‑‑GCC‑AAAA‑TACCCTTTTGAAAAGCGCCTTGAAGTCGTGaa                                                                                                         >  1:21013S57/1‑200 (MQ=37)                                                                                             gTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACGA‑‑‑TGAAATGGAATAGCCCC‑TAATATGTCAAA‑GCC‑AAAA‑TACCCTTT‑GAAAAGCGCCTTGAAGTCGTGAATc                                                                                                       >  1:9001S28/1‑200 (MQ=37)                                                                                                   ggCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccgatgcgtgaataggcgatgg                                                                                                          <  1:25288S48‑M1/200‑102 (MQ=255)                                                                                                      gTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcggccgatgcgtgaataggcgatggcggcca                                                                                                       >  1:10504S11‑M1/1‑96 (MQ=255)                                                                                                         gCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACGA‑‑‑TGAAATGGAATAGCCCC‑TAATATGTCAAA‑GCC‑AAAA‑TACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTcaca                                                                                            <  1:15493S50/200‑1 (MQ=35)                                                                                                          ccTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccgatgcgtgaataggcgatggcggccag                                                                                                   >  1:21788S76‑M1/1‑92 (MQ=255)                                                                                                            ttGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccgatgcgtgaataggcgatggcggccagct                                                                                                 >  1:19055S49‑M1/1‑90 (MQ=255)                                                                                                              gCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACGA‑‑‑TGAAATGGAATAGCCCC‑TAATATGTCAAA‑GCC‑AAAA‑TACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACtga                                                                                       >  1:3640S147/1‑200 (MQ=35)                                                                                                                 cgcgGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccgatgcgtgaataggcgatggcggccagcttgcct                                                                                            <  1:15229S5‑M1/200‑116 (MQ=255)                                                                                                                    ggg‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAGGGTAGCGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACGAAAACGAAATGGAATAGCCCC‑TAATATGTCAAA‑GCC‑AAAA‑TACCCTTTT‑AAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTgatgat                                                                                   <  1:20328S19/200‑1 (MQ=21)                                                                                                                      g‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACGA‑‑‑TGAAATGGAATAGCCCC‑TAATATGTCAAAAGCCCAAAA‑TACCCTTTTGAAAGGCGCCTTGAAGTTGTGAATCA‑TGATTCACAACTGATGATGGt                                                                                <  1:9013S3/200‑1 (MQ=25)                                                                                                                                cAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccgatgcgtgaataggcgatggcggccagcttgccttcaatcttctcga                                                                               <  1:16752S76‑M1/200‑129 (MQ=255)                                                                                                                                   ggCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCCCTCTCCAGcagggcgttcagctcggcctcgcccagccaggcgatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccgatgcgtgaataggcgatggcggccagcttgccttcaatcttctcgat                                                                              >  1:27749S7‑M1/1‑71 (MQ=255)                                                                                                                                    gcg‑‑cTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccgatgcgtgaataggcgatggcggccagcttgccttcaatcttctcgatata                                                                           >  1:13817S17‑M1/1‑68 (MQ=255)                                                                                                                                            aTT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACGA‑‑‑TGAAATGGAATAGCCCC‑TAATATGTCAAA‑GCC‑AAAA‑TACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTC‑GGCAc                                                            <  1:29905S14/200‑1 (MQ=33)                                                                                                                                                aaGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccgatgcgtgaataggcgatggcggccagcttgccttcaatcttctcgatatagaccccttc                                                                  <  1:10647S8‑M1/200‑142 (MQ=255)                                                                                                                                                 aGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑CATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccgatgcgtgaataggcgatggcggccagcttgccttcaatcttctcgatatagaccccttca                                                                 <  1:26913S3‑M1/200‑143 (MQ=255)                                                                                                                                                      tCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccgatgcgtgaataggcgatggcggccagcttgccttcaatcttctcgatatagaccccttcacgccc                                                            >  1:15174S19‑M1/1‑53 (MQ=255)                                                                                                                                                       cgcgAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCGAT‑‑‑TC‑GGACGA‑‑‑TGAAATGGAATAGCCCC‑TAATATGTCAAA‑GCC‑AAAA‑TACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTC‑GGCACGTTTTG‑GTGTccc                                              <  1:28310S7/200‑1 (MQ=17)                                                                                                                                                        gcgAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACGA‑‑‑TGAAATGGAATAGCCCC‑TAATATGTCAAA‑GCC‑AAAA‑TACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTC‑GGCACGTTTTG‑GTGTc                                                >  1:6509S8/1‑200 (MQ=33)                                                                                                                                                            gaCGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccgatgcgtgaataggcgatggcggccagcttgccttcaatcttctcgatatagaccccttcacgcccgtccag                                                      >  1:32321S3‑M1/1‑47 (MQ=255)                                                                                                                                                             aCGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtaggcaaagcagatagagatgcgtgaataggcgatggcggccagcttgccttcaatcttctcgatatagaccccttcacgcccgtccaggatc                                                     >  1:9464S80‑M1/1‑46 (MQ=255)                                                                                                                                                              cgcgAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccgatgcgtgaataggcgatggcggccagcttgccttcaatcttctcgatatagaccccttcacgcccgtccagga                                                    <  1:31133S20‑M1/200‑156 (MQ=255)                                                                                                                                                              cgcgAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACGA‑‑‑TGAAATGGAATAGCCCC‑TAATATGTCAAA‑GCC‑AAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTC‑GGCACGTTTTG‑GTGTCCCCCg                                           <  1:13079S23/200‑1 (MQ=17)                                                                                                                                                              cgcgAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACGA‑‑‑TGAAATGAGGTAGCCCC‑TAATATGTCAAA‑GCC‑AAAG‑TACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTC‑GGCACGTTTTG‑GTGTCCCCCGa                                          <  1:31712S17/200‑1 (MQ=17)                                                                                                                                                                   gggT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccgatgcgtgaataggcgatggcggccagcttgccttcaatcttctcgatatagaccccttcacgcccgtccaggatcccc                                               >  1:29055S24‑M1/1‑40 (MQ=255)                                                                                                                                                                   gggT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACGA‑‑‑TGAAATGGAATAGCCCC‑TAATATGTCAAA‑GCC‑AAAA‑TACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTC‑GGCACGTTTTGAGTGTccccaaaccca                                      >  1:1140S8/1‑193 (MQ=17)                                                                                                                                                                        ggcgggcgTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccgatgcgtgaataggcgatggcggccagcttgccttcaatcttctcgatatagaccccttcacgcccgtccaggatccccagat                                           <  1:21809S25‑M1/200‑165 (MQ=255)                                                                                                                                                                        ggcgggcgTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccgatgcgtgaataggcgatggcggccagcttgccttcaatcttctcgatatagaccccttcacgcccgtccaggatccccagat                                           >  1:28231S11‑M1/1‑36 (MQ=255)                                                                                                                                                                              cgTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACGA‑‑‑TGAAATGGAATAGCCCT‑GAATATGTCAAA‑GCC‑AAAA‑TACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTC‑GGCACGTTTTG‑GTGTCCCCCGAACCCAGGTCAGGACa                           <  1:15190S16/200‑1 (MQ=14)                                                                                                                                                                                tAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACGA‑‑‑TGAAATGGAATAGCCCCGAAATATGTCAAA‑GCC‑AAAA‑TACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCCGGCACGTTTTG‑GTGTCCCC‑GAACCCAGGTCAGGACAt                          <  1:23447S55/200‑1 (MQ=14)                                                                                                                                                                                 aaaGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccgatgcgtgaataggcgatggcggccagcttgccttcaatcttctcgatatagaccccttcacgcccgtccaggatccccagatgggtggtct                                  <  1:16567S22‑M1/200‑174 (MQ=255)                                                                                                                                                                                 aaaGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACGA‑‑‑TGAAATGGAATAGCCCC‑TAATATGTCAAA‑GCC‑AAAA‑TACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTC‑GGCACGTTTTG‑GTGTCCCCCGAACCCAGGTCAGGACATgg                        >  1:22299S46/1‑200 (MQ=31)                                                                                                                                                                                  aaGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccgatgcgtgaataggcgatggcggccagcttgccttcaatcttctcgatatagaccccttcacgcccgtccaggatccccagatgggtggtctg                                 <  1:8547S122‑M1/200‑175 (MQ=255)                                                                                                                                                                                  aaGGTAGTGTACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccgatgcgtgaataggccatggcggccagcttgccttcaatcttctcgatatagaccccttcacgcccgtccaggatccccagatgggtggtctg                                 <  1:3223S200‑M1/200‑175 (MQ=255)                                                                                                                                                                                         tgtACT‑GATAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccgatgcgtgaataggcgatggcggccagcttgccttcaatcttctcgatatagaccccttcacgcccgtccaggatccccagatgggtggtctgcccggtc                          <  1:30557S10‑M1/200‑182 (MQ=255)                                                                                                                                                                                         tgtACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTTTGGACGA‑‑‑TGAAATGGAATAGCCCC‑TAATATGTCAAA‑GCC‑AAAA‑TACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTC‑GGCACGTTTTG‑GTGTCCCCCGAACCCAGGTCAGGACATGGGTTGccc                 >  1:2035S17/1‑200 (MQ=14)                                                                                                                                                                                            aCT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACGA‑‑‑TGAAATGGAATAGCCCC‑TAATATGTCAAA‑GCC‑AAAA‑TACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTC‑GGCACGTTTTG‑GTGTCCCCCGAACCCAGGTCAGGACATGGGTTGCCCTCTa             >  1:13916S82/1‑200 (MQ=11)                                                                                                                                                                                                  tAGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccgatgcgtgaataggcgatggcggccagcttgccttcaatcttctcgatatagaccccttcacgcccgtccaggatccccagatgggtggtctgcccggtccgccggga                  <  1:3636S17‑M1/200‑190 (MQ=255)                                                                                                                                                                                                  tAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACGA‑‑‑TGAAATGGAATAGCCCC‑TAATATGTCAAA‑GCC‑AAAA‑TACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTC‑GGCACGTTTTG‑GTGTCCCCCGAACCCAGGTCAGGACATGGGTTGCCCTCTATGaaa        >  1:17705S20/1‑200 (MQ=11)                                                                                                                                                                                                   aGCC‑‑CTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccgatgcgtgaataggcgatggcggccagcttgccttcaatcttctcgatatagaccccttcacgcccgtccaggatccccagatgggtggtctgcccggtccgccgggac                 <  1:18641S22‑M1/200‑191 (MQ=255)                                                                                                                                                                                                     cc‑‑cTCCAGcagggcgttcagctcggcctcgcccagccaggcaatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccgatgcgtgaataggcgatggcggccagcttgccttcaatcttctcgatatagaccccttcacgcccgtccaggatccccagatgggtggtctgcccggtccgccgggacag               <  1:3441S13‑M1/200‑193 (MQ=255)                                                                                                                                                                                                      c‑‑cTCCAGTGTACTGCACCCATTTTGTT‑GGACGA‑‑‑TGAAATGGAATAGCCCC‑TAATATGTCAAA‑GCC‑AAAA‑TACCCTTT‑GAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTC‑GGCACGTTTTG‑GTGTCCCC‑GAACCCAGGTCAGGACATGGGTTGCCCTCTATGAAAAACATg  >  1:28303S10/1‑200 (MQ=11)                                                                                                                                                                                                          tCCAGcagggcgttcagctcggcctcgcccagccaggcgatcaacaccttgccgatggcggtggcgtgcaccggcaggcggcggccgatgcgtgaataggcgatggcggccagcttgccttcaatcttctcgatatagaccccttcacgcccgtccaggatccccagatgggtgacctgcccggtccgccgggacagctc            >  1:25671S42‑M1/1‑5 (MQ=255)                                                                                                                                                                                                              |                                                                                                                                                                                                              AGCGTCGACAGGCTCAGGGCGGCGATGACGCGGGACTCGTGGTTCCACACCGGCACCGCCACGCAGCGCACGCCCTGCTCGTTCTCTTCGCTGTCCAGGGCGTAGCCTTGCTCGCGGG‑‑TCTGCGCCAGGGCG‑‑CTCATT‑AAGGCTTCGCGAGACGCGAGGGT‑GGCGGGCGTAAAGGTAGTGTACT‑GATAGCC‑‑CTCCAGTGTACTGCACCCATTTTGTT‑GGACGA‑‑‑TGAAATGGAATAGCCCC‑TAATATGTCAAA‑GCC‑AAAA‑TACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTC‑GGCACGTTTTG‑GTGTCCCCCGAACCCAGGTCAGGACATGGGTTGCCCTCTATGAAAAACATG  >  NC_010473/261829‑262220

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 50 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.