New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_010473	1823174 =	1 (0.030)	30 (0.780)	27/398	0.7	60.6%	coding (145/816 nt)	mepH	peptidoglycan DD‑endopeptidase MepH
	?	NC_010473	3199469 =	38 (0.990)					pseudogene (665/669 nt)	nupG	nucleoside permease NupG

GTAAATCAGACGCAGGCATGATAGACCTGCCTTTACAGAGGGACGCTCAGTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTG‑‑C‑TACCACTCATATC‑ACCAAAAAAGCAGATA‑‑AAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAA‑CAGCGAAAAAAGCCGCCAGTAAAA‑GTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCAATAAAACGGCCTCAGCCAGCTTTACCGAAAAGTGTACCAAACGTAAGGGCTATA  >  NC_010473/1822981‑1823372                                                                                                                                                                                                        |                                                                                                                                                                                                         gTAAATCAGACGCAGGCATGATAGACCTGCCTTTACAGAGGGACGCTCAGTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTG‑‑C‑TACCACTCATATC‑ACCAAAAAAGCAGATA‑‑AAA‑GAAAAGCACGGc                                                                                                                                                                                                   <  1:15495S1/200‑1 (MQ=255)             cgttaagctgttgagtcgttttaagtgtaattcggggcagaattggtaaagagagtcgtgtaaaatatcgagttcgcacatcttgttgtctgattattgatttttcgcgaaaccatttgatgattgacaagatgtgtatccaccttaacttaatgatttttaccaaaatcattaggggattcatcagAGCACGGCAacca                                                                                                                                                                                              <  1:17116S9‑M1/13‑1 (MQ=255)                 cATGATAGACCTGCCTTTACAGAGGGACGCTCAGTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTG‑‑C‑TACCACTCATATC‑ACCAAAAAAGCAGATA‑‑AAAAGAAAAGCACGGCActgagagatcccct                                                                                                                                                                                    <  1:21886S16‑M1/200‑15 (MQ=255)                  aTGATAGACCTGCCTTTACAGAGGGACGCTGAGTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTG‑‑C‑TACCACTCATATC‑ACCAAAAAAGCAGATA‑‑AAAAGAAAAGCACGGCActgagagatcccctc                                                                                                                                                                                   >  1:29871S2‑M1/1‑185 (MQ=255)                  aTGATAGACCTGCCTTTACAGAGGGACGCTCAGTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTG‑‑C‑TACCACTCATATC‑ACCAAAAAAGCAGATA‑‑AAAAGAAAAGCACGGCActgagagatccctca                                                                                                                                                                                   >  1:1732S67‑M1/1‑185 (MQ=255)                    tgttgagtcgttttaagtgtaattcggggcagaattggtaaagagagtcgtgtaaaatatcgagttcgcacatcttgttgtctgattattgatttttcgcgaaaccatttgatcatatgacaagatgtgtatccaccttaacttaatgatttttaccaaaatcattaggggattcatcagAGCACGGCAACCACCaaaaa                                                                                                                                                                                       >  1:18764S19‑M1/181‑200 (MQ=255)                        gACCTGCCTTTACAGAGGGACGCTCAGTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTCACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTGAACTTACCACTCATATC‑ACCAAAAAGACAG‑‑‑‑‑AAAAGAAAAGCACGGCActgagagatcccctgataatt                                                                                                                                                                             <  1:5913S6‑M1/200‑22 (MQ=255)                           tcgttttaagtgtaattcggggcagaattggtaaagagagtcgtgtaaaatatcgagttcgcacatcttgttgtctgattattgatttttcgcgaaaccatttgatcatatgacaagatgtgtatccaccttaacttaatgatttttaccaaaatcattaggggattcatcagAGCACGGCAACCACCAAAAAGACCCAg                                                                                                                                                                                <  1:3876S71‑M1/27‑1 (MQ=255)                                  aagtgtaattcggggcagaattggtaaagagagtcgtgtaaaatatcgagttcgcacatcttgttgtctgattattgatttttcgcgaaaccatttgatcatatgacaagatgtgtatccaccttaacttaatgatttttaccaaaatcattaggggattcatcagAGCACGGCAACCACCAAAAAGACCCAGAAAA‑CAg                                                                                                                                                                        >  1:26152S2‑M1/167‑200 (MQ=255)                                    cAGAGGGACGCTCAGTGGCGCGGATAAA‑CTCATCTCGATCACGCTCTGTGCTTTCTTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTG‑‑C‑TACCACTCATATC‑ACCAAAAAAGCAGAT‑‑‑AAAAGAAAAGCACGGCActgagagatcccctcataatttccccaaagcgtaa                                                                                                                                                               >  1:12975S15‑M1/1‑165 (MQ=255)                                          ttcggggcagaattggtaaagagagtcgtgtaaaatatcgagttcgcacatcttgttgtctgattattgatttttcgcgaaaccatttgatcatatgacaagatgtgtatccaccttaacttaatgatttttaccaaaatcattaggggattcatcagAGCGCCGCAACCACCAAAAAGACCCAGAAAA‑CAGCGaaaaaa                                                                                                                                                                <  1:26957S6‑M1/42‑1 (MQ=255)                                             gCTCAGTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTG‑‑C‑TACCACTCATATC‑ACCAAAAAAGCAGATA‑‑AAAAGAAAAGCACGGCActgagagatcccctcatgatttcccaaagcgtaaccatgtgt                                                                                                                                                        >  1:20190S47‑M1/1‑158 (MQ=255)                                                cAGTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTG‑‑C‑TACCACTCATATC‑ACCAAAAAAGCAGATA‑‑AAAAGAAAAGCACGGCActggagatcccctcataatttccccaaagcgtaaccatgtgtgaa                                                                                                                                                     <  1:8501S15‑M1/200‑46 (MQ=255)                                                 aGTGGCACAGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGT‑‑TG‑‑‑‑TACCACTCATATC‑ACCAAAAAAGCAGATA‑‑AAAAGAAAAGCACGGCActgagagatcccctcataatttccccaaagcgtaaccatgtgtgaataa                                                                                                                                                 >  1:1434S34‑M1/1‑151 (MQ=255)                                                  gTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTG‑‑C‑TACCACTCATATC‑ACC‑‑‑‑AAGCAGATA‑‑AAAAGAAAAGCACGGCActgagagatcccctcataatttccccaaagcgtaaccatgtgtgaataaat                                                                                                                                               <  1:4117S71‑M1/200‑52 (MQ=255)                                                    ggCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTG‑‑C‑TACCACTCATATC‑ACCAAAAAAGCAGATA‑‑AAAAGAAAAGCACGGCActgagagatcccctcataatttccccaaagcgtaaccatgtgtgaataa                                                                                                                                                 <  1:4544S42‑M1/200‑50 (MQ=255)                                                      ggtaaagagagtcgtgtaaaatatcgagttcgcacatcttgttgtctgattattgatttttcgcgaaaccatttgatcatatgacaaagaatgtgtatccaccttaacttaatgatttttaccaaaatcattaggggattcatcagAGCACGGCAACCACCAAAAAGACCCAGAAAA‑CAGCGAAAAAAGCCGCCAGTaaa                                                                                                                                                    >  1:8396S14‑M1/147‑200 (MQ=255)                                                           aaagagagtcgtgtaaaatatcgagttcgcacatcttgttgtctgattattgatttttcgcgaaaccatttgatcatatgacaagatgtgtatccaccttaacttaatgatttttaccaaaatcattaggggattcatcagAGCACGGCAACCACCAAAAAGACCCAGAAAA‑CAGCGAAAAAAGCCGCCAGTAAAA‑GTAc                                                                                                                                              >  1:30529S7‑M1/142‑200 (MQ=255)                                                                                   tgtgCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTG‑‑C‑TACCACTCATATC‑ACCAAAAAAGCAGATA‑‑AAAAGAAAAGCACGGCActgagagatcccctcataattttgagaaagcgtaaccatgtgtgaataaattttgagctagtagggttgcagccacgagt                                                                                                                  >  1:3245S74‑M1/1‑120 (MQ=255)                                                                                    gtgCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTG‑‑C‑TACCACTCATATC‑ACCAAAAAAGCAGATA‑‑AAAAGAAAAGCACGGCActgagagatcccctcataatttcccccaaagcgtaaccatgtgtgaataaattttgagctagtagggttgcagccacgagt                                                                                                                 >  1:12834S302‑M1/1‑119 (MQ=255)                                                                                       gcacatcttgttgtctgattattgatttttcgcgaaaccatttgatcatatgacaagatgtgtatccaccttaacttaatgatttttaccaaaatcattaggggattcatcagAGCACGGCAACCACCAAAAAGACCCCAAAAA‑CAGCGAAAAAAGCCGCCAGTAAAA‑GTACGACCAAAAGCAAAACCGCTTCTTCCGtt                                                                                                                  <  1:29871S9‑M1/87‑1 (MQ=255)                                                                                        cacatcttgttgtctgattattgatttttcgcgaaaccatttgatcatatgacaagatgtgtatccaccttaacttaatgatttttaccaaaatcattaggggattcatcagAGCACGGCAACCACCAAAAAGACCCAGAAAA‑CAGCGAAAAAAGCCGCCAGTAAAA‑GTACGACCAAAAGCAAAACCGCTTCTTCCGTTa                                                                                                                 <  1:1732S74‑M1/88‑1 (MQ=255)                                                                                        cacatcttgttgtctgattattgatttttcgcgaaaccatttgatcatatgacaagatgtgtatccaccttaacttaatgatttttaccaaaatcattaggggattcatcagAGCACGGCAACCACCAAAAAGACCCAGAAAA‑CAGCGAAAAAAGCCGCCAGTAAAA‑GTACGACCAAAAGCAAAACCGCTTCTTCCGTTa                                                                                                                 >  1:21886S9‑M1/113‑200 (MQ=255)                                                                                         tcgcacgtcttgtctgattattgatttttcgcgaaaccatttgatcatatgacagatgtgtatccaccttaacttaatgatttttaccaaaatcattaggggattcatcagTTCGCGGCAACCACCAAAAAGACCCAGAAAA‑CAGCGAAAAAAGCCGCCAGTAAAA‑GTA‑‑ACCAAAAGCAAAACCGCTTCTTCCGTAaaaa                                                                                                              <  1:2885S6‑M1/89‑1 (MQ=255)                                                                                           aCTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTG‑‑C‑TACCACTCATATCTTCGCAAAAAGCAGATA‑‑AAAAGAAAAGCACGGCActgagagatcccctcataatttccccaaagcgtaaccatgtgtgaataaattttgagctagtagggttgcagccacgagtaagtctt                                                                                                           >  1:26039S8‑M1/1‑113 (MQ=255)                                                                                                   ccaccCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTG‑‑C‑TACCACTGATATC‑ACCAAAAAAGCAGATA‑‑AAAAGAAAAGCACGGCActgagagatcccctcataattttcccaaagcgtaaccatgtgtgaataaattttgagctagtagggttgcagccacgagtaagtcttcccttgtta                                                                                                  >  1:28806S21‑M1/1‑104 (MQ=255)                                                                                                         tGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTG‑‑C‑TACCACTCATATC‑ACCAAAAAAGCAGATA‑‑AAAAGAAAAGCACGGCActgagagatccccacattttcccaaagcgtaaccatgtgtgaataaattttgagctagtagggttgcagccacgagtaagtcttcccttgttattgtgtagc                                                                                            <  1:3429S18‑M1/200‑103 (MQ=255)                                                                                                             tttAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTG‑‑C‑TACCACTCATATC‑ACCAAAAAAGCAGATA‑‑AAAAGAAAAGCACGGCActgagacatctcctaatttccccaaagcgtaaccatgtgtgaataaattttgagctagtagggttgcagccacgataagtcttcccttgttattgtgtagccagaa                                                                                        <  1:3917S45‑M1/200‑107 (MQ=255)                                                                                                              tattgatttttcgcgaaaccatttgatcatatgacaagatgtgtatccaccttaacttaatgatttttaccaaaatcgttagatcatcagAGCACGGCAACCACCAAAAAGACCCAGAAAA‑CAGCGAAAAAAGCCGCCAGTAAAA‑GTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTc                                                                                           <  1:12975S22‑M1/110‑1 (MQ=255)                                                                                                                 aCGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTG‑‑C‑TACCACTCATATC‑ACCAAAAAAGCAGATA‑‑AAAAGAAAAGCACGGCActgagagatccctcataatttccccaaagcgtaaccatgtgtgaataaattttgagctagtagggttgcagccacgagtaagtcttcccttgttattgtgtagccagaat                                                                                    >  1:27975S31‑M1/1‑90 (MQ=255)                                                                                                                  ttttcgcgaaaccatttaataatatgacaagatgtgtatccaccttaacttaatgatttttaccaaaatcatcaggggattcatcaAGCACGGCAACCACCAAAAAGACCCAGAAAA‑CAGCGAAAAAAGCCGCCAGTAAAA‑GTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTaaa                                                                                       <  1:20190S54‑M1/114‑1 (MQ=255)                                                                                                                   gCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTG‑‑C‑TACCACTCATATC‑ACCAAAAAAGCAGATA‑‑AAAAGAAAAGCACGGCActgagagatcccctcataatttccccaaagcgtaaccatgtgtgaataaattttgagctagtagggttgcagccacgagtaagtcttcccttgttattgtgtagccagaatg                                                                                  >  1:32367S24‑M1/1‑88 (MQ=255)                                                                                                                      tATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTG‑‑C‑TACCACTCATATC‑ACCAAAAAAGCAGATA‑‑AAAAGAAAAGCACGGCActgagagatcccctcataatttccccaaagcgtaaccatgtgtgaataaattttgagctagtagggttgcagccacgagtaagtcttcccttgttattgtgtagccagaatgccg                                                                               <  1:23930S15‑M1/200‑116 (MQ=255)                                                                                                                      gcgaaacgatttgatcatatgacaagatgtgtatccaccttaacttaatgatttttaccaaaatcattaggggattcatcagAGCACGGCAACCACCAAAAAGACCCAGAAAA‑CAGCGAAAAAAGCCGCCAG‑‑‑‑‑‑G‑ACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCaaaa                                                                             >  1:8501S8‑M1/83‑200 (MQ=255)                                                                                                                         aaaccatttgatcatatgacaagatgtgtatccaccttaacttaatgatttttaccaaaatcattaggggattcatcagAGCACGGCAACCACCAAAAAGACCCAGAAAA‑CAGCGAAAAAAGCCGCCAGTAAAA‑GTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCa                                                                                >  1:4117S64‑M1/80‑200 (MQ=255)                                                                                                                            gatttgatcatatgacaagatgtgtatccaccttaacttaatgatttttaccgaaaatcattaggggattcatcagAGCACGGCAACCACCAAAAAGACCCAGAAAAACAGCGAAAAAAGCCGCCAGTAAAA‑GTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCaaa                                                                              >  1:4544S35‑M1/77‑200 (MQ=255)                                                                                                                             cATGCTTCAAAGCAAGCCAGGGAGAGTTCTG‑‑C‑TACCACTCATATC‑ACCAAAAAAGCAGATA‑‑AAAAGAAAAGCACGGCActgagagatccccttataatttccccaaagcgtaaccatgtgtgaataaattttgagctagtagggttgcagccacgagtaagtcttcccttgttattgtgtagccagaatgccgcaaaact                                                                        <  1:31183S59‑M1/200‑123 (MQ=255)                                                                                                                              aTGCTTCAAAGCAAGCCAGGGAGAGTTCTG‑‑C‑TACCACTCATATC‑ACCAAAAAAGCAGATA‑‑AAAAGAAAAGCACGGCActgagagatcccctcataatttccccaaagcgtaaccatgtgtgaataaattttgagctagtagggttgcagccacgagtaaagttttcccttgttattgtgtagccagaatgccgcaaaact                                                                       <  1:59S8‑M1/200‑124 (MQ=255)                                                                                                                                gCTTCAAAGCAAGCCAGGGAGAGTTCTG‑‑C‑TACCACTCATATC‑ACCAAAAAAGCAGAT‑‑‑AAAAGAAAAGCACGGCActgagagatcccctcataatttccccaaagcgtaaccatgtgtgagataatttgaagctgagtagggttgcagccacgagtaagtcttcccttgttattgtgtagccagaatgccgcaaaacttcc                                                                    <  1:26373S2‑M1/200‑127 (MQ=255)                                                                                                                                 tgatcatatgacaagatgtgtatccaccttaacttaatgatttttaccaaaatcattaggggattcatcagAGCACGGCAACCACCAAAAAGACCCAGAAAA‑CAGCGAAAAAAGCCGCCAGTTGAA‑ACAAGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCgc                                                                        <  1:1434S41‑M1/129‑1 (MQ=255)                                                                                                                                     aaaGCAAGCCAGGGAGAGTTCTG‑‑C‑TACCACTCATATC‑ACCAAAAAAGCAGATA‑‑AAAAGAAAAGCACGGCActgaagagatcccctgataatttccccaaagcgtaaccatgtgtgaataaattttgagctagtagggttgcagccacgagtaagtcttcccttgttattgtgtagccagaatgccgcaaaacttccatgc                                                                <  1:27185S14‑M1/200‑131 (MQ=255)                                                                                                                                     aaaGCAAGCCAGGGAGAGTTCTG‑‑C‑TACCACTCATATC‑ACCAAAAAAGCAGATA‑‑AAAAGAAAAGCACGGCAcgagagagatcccctcataatttccccaaagcgtaaccatgtgtgaataaattttgagctagtagggttgcagccacgagtaagtcttcccttgttattgtgtagccagaatgccgcaaaacttccatgc                                                                <  1:5575S6‑M1/200‑131 (MQ=255)                                                                                                                                          aagcCAGGGAGAGTTCTG‑‑C‑TACCACTCATATC‑ACCAAAAAAGCAGATA‑‑AAAAGAAAAGCACGGCActaagagatcccagaatttccccaaagcgtaaccatgtgtgaataaattttgagctagtagggttgcagccacgagtaagtcttcccttgttattgtgtagccagaatgccgcaaaacttccatgcctaagcgaa                                                           <  1:1009S2‑M1/200‑136 (MQ=255)                                                                                                                                             ccAGGGAGAGTTCTG‑‑C‑TACCACTCATATC‑ACCAAAAAAGCAGATA‑‑AAAAGAAAAGCACGGCActgagagatcccctcataatttccccaaagcgtaaccatgtgtgaataaattttgagctagtagggttgcagccacgagtaagtcttcccttgttattgtgtagccagaatgccgcaaaacttccatgcctaagcgaa                                                        >  1:17116S3‑M1/1‑62 (MQ=255)                                                                                                                                                  gaaaattatg‑‑c‑taccacTCATATC‑ACCAAAAAAGCAGATA‑‑AAAAGAAAAGCACGGCActgagagatcccctcataatttccccaaagcgtaaccatgtgtgaataaattttgagctggtaggggctaggctcacgagtaagtcttcccttgttattgtgtagccagaatgccgcaaaacttccatgcctaagcgaactgt                                                   >  1:11256S4‑M1/9‑57 (MQ=255)                                                                                                                                                     tatccaccttaacttaatgatttttaccaaaatcattaggggattcatcagAGCACGGCAACCACCAAAAAGACCCAGAAAA‑CAGCGAAAAAAGCCGCCAGTAAAA‑GTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCAATaa                                                    <  1:12834S309‑M1/149‑1 (MQ=255)                                                                                                                                                     agTTCTG‑‑C‑TACCACTCATATC‑ACCAAAAAAGCAGAT‑‑‑‑AAAGAAAAGCACGGCActgagagatccccgacaatttccccaaagcgtaaccatgtgtgaataaattttgagctagtagggttgcagccacgagtaagtcttcccttgttattgtgtagccagaatgccgcaaaacttccatgcctaagcgaactgttgagagt                                              <  1:18764S25‑M1/200‑149 (MQ=255)                                                                                                                                                          tG‑‑C‑TACCACTCATATC‑ACCAAAAAAGCAGATA‑‑AAAAGAAAAGCACGGCActgagagatcccctcataatttccccaaagcgtaaccatgtgtgaataaattttgagctagtagggttgcagccacgagtaagtcttcccttgttattgtgtagccagaatgccgcaaaacttccgatcctaagcgaactgttgagagtac                                           >  1:2856S6‑M1/1‑49 (MQ=255)                                                                                                                                                             taacttaatgatttttaccaaaatcattcaggggattcatcagAGCACGGCAACCACCAAAAAGACCCAGAAAA‑CAGCGAAAAAAGCCGCCAGTAAAA‑GTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCAATAAAACGGCCt                                            <  1:28806S28‑M1/157‑1 (MQ=255)                                                                                                                                                               aacttaatgatttttaccaaaatcattaggggattcatcagAGCACGGCAACCACCAAAAAGACCCAGAAAA‑CAGCGAAAAAAGCCGCCAGTAAAA‑GTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCAATAAAACGGCCTca                                          >  1:26356S12‑M1/42‑200 (MQ=255)                                                                                                                                                                   gacTCATATC‑ACCAAAAAAGCAGATA‑‑AAAAGAAAAGCACGGCActgagagatccccataatttccccaaagcgtaaccatgtgtgaataaattttgagctagtagggttgcagccacgagtaagtcttcccttgttattgtgtagccagaatgccgcaaaacttccatgcctaagcgaactgttgagagtacgtttcgat                                     <  1:26152S8‑M1/199‑158 (MQ=255)                                                                                                                                                                    aCTCATATC‑ACCAAAAGAGCGGAAAGTAAAAGAAAAGCACGGCActgagagatcccctcataatttccccaaagcgtaaccatgtgtgaataaattttgagctagtagggttgcagccacgagtaagtcttcccttgttattgtgtagccagaatgccgcaaaacttccatgcctaagcgaactgttgagagtacgtttc                                      >  1:3876S65‑M1/1‑44 (MQ=255)                                                                                                                                                                            ttaccaaaatcattaggggattcatcagAGCACGGCAACCACCAAAAAGACCCAGAAAA‑CAGCGAAAAAAGCCGCCAGTAAAA‑GTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCAATAAAACGGCCTCAGCCAGCTTTACCg                             >  1:3658S13‑M1/29‑200 (MQ=255)                                                                                                                                                                             ttaccaaaatcattggggattcatcagAGCACGGCAACCACCAAAAAGACCCAGAAAA‑CAGCGAAAAAAGCCGCCAGTAAAA‑GTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCAATAAAACGGCCTCAGCCAGCTTTACCGa                            <  1:11226S7‑M1/173‑1 (MQ=255)                                                                                                                                                                                caaaatcattaggggattcatcagAGCACGGCAACCACCAAAAAGACCCAGAAAA‑CAGCGAAAAAAGCCGCCAGTAAAA‑GTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCAATAAAACGGCCTCAGCCAGCTTTACCGaaaa                         >  1:3429S11‑M1/25‑200 (MQ=255)                                                                                                                                                                                        attagggatccatcagAGCACGGCAACCACCAAAAAGACCCAGAAAA‑CAG‑‑AAAAAAGCCGCCAGTAAAA‑GTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCAATAAAACGGCCTCAGCCAGCTTTACCGAAAAGTGTACCaaa               <  1:27975S38‑M1/184‑1 (MQ=255)                                                                                                                                                                                         taggggattcatcagAGCACGGCAACCACCAAAAAGACCCAGAAAA‑CAGCGAAAAAAGCCGCCAGTAAAA‑GTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCAATAAAACGGCCTCAGCCAGCTTTACCGAAAAGTGTACCaa                <  1:2945S1‑M1/185‑1 (MQ=255)                                                                                                                                                                                          aggggattcatcagAGCACGGCAACCACCAAAAAGACCCAGAAAA‑CAGCGAAAAAAGCCGCCAGTAAAA‑GTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAA‑CTC‑‑AGCAAACACGCCGTCAATAAAACGGCCTCAGCCAGCTTTACCGAAAAGTGTACCAAACGt            >  1:3917S38‑M1/15‑200 (MQ=255)                                                                                                                                                                                            gggattcatcagAGCACGGCAACCACCAAAAAGACCCAGAAAA‑CAGCGAAAAAAGCCGCCAGTAAAA‑GTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCGATAAAATGGCTCCAGCCAGCTTTACCGAAAAGTGTACCAAACg             >  1:23930S8‑M1/13‑200 (MQ=255)                                                                                                                                                                                                   agaaaagCACGGCActgagagatcccctcataatttccccaaagcgtaaccatgtgtgaataaattttgagctagtagggttgcagccacgagtaagtcttcccttgttattgtgtagccagaatgccgcaaaacttccatgcctaagcgaactgttgagagtacgtttcgatttctgactgtgttagcctggaagtgct        <  1:30529S13‑M1/200‑187 (MQ=255)                                                                                                                                                                                                    tcagAGCACGGCAACCACCAAAAAGACCCAGAAAA‑CAGCGAAAAAAGCCGCCAGTAAAA‑GTACTACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCAATAAAACGGCCTCAGCCAGCTTTACCGAAAAGTGTACCAAACGTAAGGGCt     >  1:31183S52‑M1/5‑200 (MQ=255)                                                                                                                                                                                                      agAGCACGGCAACCACCAAAAAGACCCAGAAAAACAGCGAAAAAAGCCGCCAGTAAAAAGTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCAATAAAACGGCCTCAGCCAGCTTTACCGAAA‑GTGTACCAAACgtaaggctat    >  1:59S1‑M1/3‑196 (MQ=255)                                                                                                                                                                                                       gAGCACGGCAACCACCAAAAAGACCCAGAAAA‑CAGCGAAAAAAGCCGCCAGTAAAA‑GTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCAATAAAACGGCCTCAGCCAGCTTTACCGAAAAGTGTACCAAACGTAAGGGCtata  >  1:27185S7‑M1/2‑200 (MQ=255)                                                                                                                                                                                                        |                                                                                                                                                                                                         GTAAATCAGACGCAGGCATGATAGACCTGCCTTTACAGAGGGACGCTCAGTGGCGCGGATAAACCGTATTTCGATCACGCTCTGTGCTTTACTTTTTACCACCCTGCCTTTAACGCCTATGGCCCATGCTTCAAAGCAAGCCAGGGAGAGTTCTG‑‑C‑TACCACTCATATC‑ACCAAAAAAGCAGATA‑‑AAAAGAAAAGCACGGCAACCACCAAAAAGACCCAGAAAA‑CAGCGAAAAAAGCCGCCAGTAAAA‑GTACGACCAAAAGCAAAACCGCTTCTTCCGTTAAAAAATCTTCCATTACCGCTTCTAAAAACGCCAAAACTCGCAGCAAACACGCCGTCAATAAAACGGCCTCAGCCAGCTTTACCGAAAAGTGTACCAAACGTAAGGGCTATA  >  NC_010473/1822981‑1823372

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 47 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.