| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_010473 | 1455332 = | 43 (1.120) | 31 (0.870) +CGTTACTGGTTTCAT |
23/368 | 0.9 | 45.6% | coding (1/978 nt) | pspF | phage shock protein operon transcriptional activator |
| ? | NC_010473 | 3365613 = | 37 (0.970) | intergenic (+244/+370) | yhaC/rnpB | YhaC family protein/RNase P RNA component class A | |||||
CCGCGCAGTTAAGGGAAATAAACGGCCCTTGCCAACGGGAGGAGAGATAATGCAGGCGGCTGGCAATCAGCTCTTTACCGGTGCCGCGTTCGCCGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGTTGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCAA‑GAGGACAACATTATGGGTATTTTTTCTCGCTTTGCCG > NC_010473/1455134‑1455523 | ccgcGCAGTTAAGGGAAATAAACGGCCCTTGCCAACGGGAGGAGAG‑‑AATGCAGGCGGCTGGCAATCAGCTCTTTACCGGTGCAGCGTTCGCCGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCGCCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCatgat > 1:6727S75/1‑200 (MQ=255) gcAGTTAAGGGAAATAAACGGCCCTTGCCAACGGGAGGAGAGATAATGCAGGCGGCTGGCAATCAGCTCTTTACCGGTGCCGCGTTCGCCGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCAtgatga < 1:32043S13/200‑1 (MQ=255) ctatacccaaaagaaagcggcttatcggtcagtttcacctgttttacgtaaaaacccgcttcggcgggtttttacttttggaggggcagaaagatgaatgactgtccacgacactatacccaaaagaaagcggcttatcggtcagttttacctgatgtacgtaataaaccgttccggcgggtttatgaaaccagtaacgt > 1:13535S30‑M1/200‑200 (MQ=255) cccaaaagaaagcggcttatcggtcagtttcacctgttttacgcaaactcgcttcggcgggtttttacttttggaggggcagaaagatgaatgactgtccacgacactatacccaaaagaaagcggcttatcggtcagttttacctgatgtacgtaataaaccgttccggcgggtttatgaaaccagtaacgTGATGaaa > 1:5884S12‑M1/193‑200 (MQ=255) caaaagaaagcggcttattggtcagtttcacctgttttacgtaaaaacccgcttcggcgggtttttacttttggaggggcagaaagatgaatgactgtccacgacactatacccaaaagaaagcggcttatcggtcagttttacctgatgtacgtaataaaccgttccggcgggtttatgaaaccagtaacgTGATGaaa > 1:20664S36‑M1/193‑200 (MQ=255) gAAATAAACGGCCCTTGCCAACGGGAGGAGAGATAATGCAGGCGGCTGGCAATCAGCTCTTTACCGGTGCCGCGTTCGCCGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTTTCTGTATT‑‑CTGCCATGATGAAATTCGcc < 1:11509S44/200‑1 (MQ=255) aaaTAAACGGCCCTTGCCAACGGGAGGAGAGATAATGCAGGCGGCTGGCAATCAGCTCTTTACCGGTGCCGCGTTCGCCGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACt < 1:9760S6/200‑1 (MQ=255) aaTAAACGGCCCTTGCCAACGGGAGGAGAGATAATGCAGGCGGCTGGCAATCAGCTCTTTACCGGTGCCGCGTTCGCCGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTGGCCTCACCA‑GTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTg > 1:16554S75/1‑200 (MQ=255) aaagcggcttatcggtcagtttcacctgttttacgtaaaaacccgcttcggcgggtttttacttttggaagggggcagaaagatgaatgactgtccacgacactatacccaaaagaaagcggcttatcggtcagttttacctgatgtacgtaataaaccgttccggcgggtttatgaaaccagtaacgTGATGAAATTCg > 1:28288S5‑M1/189‑200 (MQ=255) ccTTGCCAACGGGAGGAGAGATAATGCAGGCGGCTGGCAATCAGCTCTTTACCGGTGCCGCGTTCGCCGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑aa > 1:15512S2/1‑200 (MQ=255) ttGCCAACGGGAGGAGAGATAATGCAGGCGGCTGGCAATCAGCTCTTTACCGGTGCCGCGTTCGCCGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AAtt < 1:14619S24/200‑1 (MQ=255) cggtcagtttcacctgttttacgtaaaaacccgcttcggcgggtttttacttttggaggggcagaaagatgaatgactgtccacgacactatacccaaaaagaaagcggcttatcggtcagttttacctgatgtacgtaataaaccgttccggcgggtttatgaaaccagtaacgTGATGAAATTCGCCACTTGTTAgtg > 1:32008S19‑M1/176‑200 (MQ=255) aaCGGGAGGAGAGATAATGCAGGCGGCTGGCAATCAGCTCTTTACCGGTGCCGCGTTCGCCGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑a < 1:15537S48/200‑1 (MQ=255) cGGGAGGAGAGATAATGCAGGCGGCTGGCAATCAGCTCTTTACCGGTGCCGCGTTCGCCGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑c < 1:5662S34/200‑1 (MQ=255) gggAGGAGAGATAATGCAGGCGGCTGGCAATCAGCTCTTTACCGGTGCCGCGTTCGCCGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑t < 1:6720S17/200‑1 (MQ=255) gaggagAGATAATGCAGGCGGCTGGCAATCAGCTCTTTACCGGTGCCGCGTTCGCCGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑a < 1:17717S14/200‑1 (MQ=255) tcacctgttttacattaaaacgcgcttcggcgggtttttacttttggaggggcagaaagatgaatgactgtccacgacactatacccaaaagaaagcggcttatcggtcagttttacctgatgtacgtaataaaccgttccggcgggtttatgaaaccagtaacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑a < 1:27182S50‑M1/35‑1 (MQ=255) gaTAATGCAGGCGGCTGGCAATCAGCTCTTTACCGGTGCCGCGTTCGCCGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑c < 1:29426S21/200‑1 (MQ=255) tttacgtaaaaacccgcttcggcgggtttttacttttggaggggcagaaagatgaatgactgtccacgacactatacccaaaagaaagcggcttatcggtgagttttacctgatgtacgtaataaaccgttccggcgggtttatgaaaccagtaacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATcc < 1:11659S11‑M1/43‑1 (MQ=255) gCAGGCGGCTGGCAATCAGCTCTTTACCGGTGCCGCGTTCGCCGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGCCTGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGtt < 1:32563S12/200‑1 (MQ=255) acgtaaaaacccgcttcggcgggtttttactttggaggggcagaaagatgaatgactgtccacgacactatacccaaaagaaagcggcttatcggtcagttttacctgatgtacgtaataaaccgttccggcgggtttatgaaaccagtaacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑t‑‑‑‑‑‑c‑atcccggc < 1:7498S11‑M1/47‑5 (MQ=255) aGGCGGCTGGCAATCAGCTCTTTACCGGTGCCGCGTTCGCCGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGttatt > 1:27188S21/1‑197 (MQ=255) taaaaacccgcttcggcgggtttttactttggaggggcagaaagatgaatgactgtccacgacactatacccaaaagaaagcggcttatcggtcagttttacctgatgtacgtaataaaccgttccggcgggtttatgaaaccagtaacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCCGg‑cacg < 1:8090S8‑M1/50‑3 (MQ=255) gcggcTGGCAATCAGCTCTTTACCGGTGCCGCGTTCGCCGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCG‑GATAAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGt < 1:11795S2/200‑1 (MQ=255) taaaaacccgcttcggcgggtttttacttggaggggcagaaagatgaatgactgtccacgacactatacccaaaagaaagcggcttatcggtcagttttacctgatgtacgtaataaaccgttccggcgggtttatgaaaccagtaacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCCgg‑cacgt < 1:19608S5‑M1/51‑4 (MQ=255) ggcTGGCAATCAGCTCTTTACCGGTGCCGCGTTCGCCGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCGGAAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCA‑GTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCTGAA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGtt > 1:14581S11/1‑200 (MQ=255) ccgcttcggcgggtttttacttttggaggggcagaaagatgaatgactgtccacgacactatacccaaaagaaagcggcttatcggtcagttttacctgatgtacgtaataaaccgttccggcgggtttatgaaaccagtaacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑atcccgg‑cacgtggccg > 1:693S17‑M1/145‑192 (MQ=255) cAATCAGCTCTTTACCGGTGCCGCGTTCGCCGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGTTGAtt‑‑‑ctt > 1:29801S3/1‑200 (MQ=255) gcttcggcgggtttttattggaggggcagaaagatgaatgactgtccacgacactatacccaaaagaaagcggcttatcggtcagttttacctgatgtacgtaataaaccgttccggcgggtttatgaaaccagtaacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑aa‑‑c‑‑‑‑t‑‑‑‑‑‑c‑atcccgg‑cacgtggccaaagat < 1:22529S6‑M1/61‑14 (MQ=255) cAGCTCTTTACCGGTGCCGCGTTCGCCGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGTTGATT‑‑‑CTTCAAt > 1:14237S46/1‑200 (MQ=255) aGCTCTTTACCGGTGCCGCGTTCGCCGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGTTGATT‑‑‑CTTCAATc < 1:28773S62/200‑1 (MQ=255) aGCTCTTTACCGGTGCCGCGTTCGCCGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGTTGATT‑‑‑CTTCAATc < 1:13596S151/200‑1 (MQ=255) ttACCGGTGCCGCGTTCGCCGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGTTGATT‑‑‑CTTCAATC‑AGA‑TCt > 1:22184S21/1‑200 (MQ=255) ttttacttttggaggggcagaaagatgaatgactgtccacgacactatacccaaaagaaagcggcttatcggtcagttttacctgatgtacgtaataaaccgttccggcgggtttatgaaaccagtaacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑CTATCCCGG‑CACGTGGCCGAAGATT‑‑‑CTTCAAt > 1:29495S3‑M1/131‑200 (MQ=255) ttacttttggaggggcagaaagatgaatgactgtccacgacactatacccaaaaaagaaagcggcttatcggtcagttttacctgatgtacgtaataaaccgttccggcgggtttatgaaaccagtaacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCCGG‑CACGTGGCCGAAGATT‑‑‑CTTCAATc > 1:14009S22‑M1/131‑200 (MQ=255) tACCGGTGCCGCGTTCGCCGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGTTGATT‑‑‑CTTCAATC‑AGA‑TCtt > 1:24547S31/1‑200 (MQ=255) ccGGTGCCGCGTTCGCCGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGTTGATT‑‑‑CTTCAATC‑AGA‑TCTTta < 1:30859S34/200‑1 (MQ=255) tttggaggggcagaaagatgaatgactgtccacgacactatacccaaaagaaagcggcttatcggtcagttttacctgatgtacgtaataaaccgttccggcgggtttatgaaaccagtaacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCCGG‑CACGTGGCCGAAGATTT‑‑CTTCAATC‑AGA‑TCt < 1:1041S92‑M1/77‑1 (MQ=255) ccGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGTTGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATa < 1:12996S20/200‑1 (MQ=255) cGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGTTGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATaa > 1:9423S25/1‑200 (MQ=255) gatgaGCACCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGTTGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATaaaaaa < 1:29469S16/200‑1 (MQ=255) aCCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGTTGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCAc > 1:18093S4/1‑200 (MQ=255) tttGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGTTGATC‑‑‑TTTCAACCCAGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCaa < 1:28882S5/200‑1 (MQ=255) tGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGTTGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAAtt > 1:18965S24/1‑200 (MQ=255) cacgacactatacccaaaagaaagcggcttatcggtcagttttacctgatgtacgtaataaaccgttccggcgggtttatgaaaccagtaacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCCGG‑CACGTGGCCGAAGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACg > 1:12745S25‑M1/94‑200 (MQ=255) gcggtgTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGTTGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTAt > 1:17291S1/6‑200 (MQ=255) aGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCACCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGTTGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTAtt > 1:14626S99/1‑200 (MQ=255) cGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGTTGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTATTaa < 1:16405S65/200‑1 (MQ=255) gTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAG‑GTGAAATCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGTTGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTggtatcgac < 1:28338S6/200‑9 (MQ=255) gtgcgatccG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑TTTTTTGG‑TTCCTGG‑CATGTTGCTGTTGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTAtt > 1:15427S10/9‑200 (MQ=255) cGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGTTGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTTTTAACaagt > 1:29509S13/1‑197 (MQ=255) cGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGTTGATT‑‑‑CTTCAATC‑AAAAGATCAATAAATCAAAACAG‑TAAAAAATTGGCACGCAAATTGTATTAACAGt < 1:3597S19/200‑1 (MQ=255) ccaaaagaaagcggcttatcggtcagttttacctgatgtacgtaataaaccgttccggcgggtttatgaaaccagtaacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑CA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCCGG‑CACGTGGCCGAAGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATaaaaaattggcacgttaaccttgcgtt > 1:10240S21‑M1/81‑187 (MQ=255) aagcggcttatcggtcagttttacctgatgtacgtaataaaccgttccggcgggtttatgaaaccagtaacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCCGG‑CACGTGGCCGAAGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTGTTAACAGTTcag > 1:29928S18‑M1/73‑200 (MQ=255) aaaCCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGTTGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGAc > 1:14880S21/1‑200 (MQ=255) aCCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAATAAATTATCTT‑‑TGTATTTTCTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTG‑‑CATGTTGCTGTTGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGACa < 1:28958S26/200‑1 (MQ=255) cagttttacctgatgtacgtaataaaccgtctccggcgggtttatgaaaccagtaacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCC‑GG‑CATGTGGCCGA‑GATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTGTTAACAGTTCAGCAGGACAAGCCTGAAc > 1:7502S15‑M1/59‑200 (MQ=255) cagttttacctgatgtacgtaataaaccgttccggcgggtttatgaaaccagtaacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑T‑‑‑‑C‑‑‑‑‑‑C‑ATCCCGG‑CACGTGGCCGAAGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTGTTAACAGTTCAGCAGGACAAGCCTGaa > 1:19473S5‑M1/58‑200 (MQ=255) cagttttacctgatgtacgtaataaaccgttccggcgggtttatgaaaccagtaacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCCGG‑CACGTGGCCGAAGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTGTTAACAGTTCAGCAGGACAAGCCTGaa > 1:25727S54‑M1/58‑200 (MQ=255) gttttacctgatgtacgtaataaaccgttccggcgggtttatgaaaccagtaacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCCGG‑CACGTGGCCGAAGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTGTTAACAGTTCAGCAGGACAAGCCTGAACg > 1:6967S3‑M1/56‑200 (MQ=255) acctctcatgtacgtaataaaccgttccggcgggtttatgaaaccagtaacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCCGG‑CACGTGGCCGAAGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTGTTAACAGTTCAGCAGGACAAGCCTGAACGCAg < 1:22769S1‑M1/148‑1 (MQ=255) ga‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGTTGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCaa > 1:1016S41/1‑200 (MQ=255) ga‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGTTGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGGATGAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCaa < 1:5326S6/200‑1 (MQ=255) tgatgtacgtaataaaccgttccggcgggtttatgaaaccaaataacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCCGG‑CACGTGGCCGAAGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTGTTAACAGTTCAGCAGGACAAGCCTGAACGCAGAAAt > 1:14813S24‑M1/49‑200 (MQ=255) atgtacgtaataaaccgttccggcgggtttatgaaaccagtaacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCCGG‑CACGTCGCCGAGGATTTTTCTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTGTTAACAGTTCAGCAGGACAAGCCTGAACGCAGAAAt < 1:10777S27‑M1/155‑1 (MQ=255) gtaataaaccgttccggcgggtttatgaaaccagtaacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCCGG‑CACGTGGCCGAAGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTGTTAACAGTTCAGCAGGACAAGCCTGAACGCAGAAatcaa‑gataca > 1:27534S19‑M1/40‑196 (MQ=255) taataaaccgttccggcgggtttatgaaaccagtaacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCCGG‑CACGTGGCC‑TT‑ATT‑‑‑TTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTGTTAACAGTTCAGCAGGACAAGCCTGAACTCAGAAATCAA‑GAGGacaac > 1:475S14‑M1/39‑200 (MQ=255) aataaaccgttccggcgggtttatgaaaccagtaacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑CAAACT‑‑‑‑‑‑C‑ATCCCGG‑CACGTGGCCGAAGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTGTTAACAGTTCAGCAGGACAAGCCTGAACGCAGAAATCAA‑GAgg > 1:1058S61‑M1/38‑200 (MQ=255) taaaccgttccggcgggtttatgaaaccagtaacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AAAAC‑‑‑‑T‑‑‑‑‑‑C‑ATCCCGG‑CACGTGGCCGAAGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTGTTAACAGTTCAGCAGGACAAGCCTGAACGCAGAAATCAA‑GAGGacaa > 1:10755S30‑M1/36‑200 (MQ=255) tCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGTTGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCAA‑GAGGACAACATTAt < 1:23069S21/200‑1 (MQ=255) aaaccgttccggcgggttataaaccagtaacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCCGG‑CACGTGGCCGAAGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAA‑TTGGCACGCAAATTGTGTTAACAGTTCAGCAGGACAAGCCTGAACGCAGAAATCAA‑GAGGACAACATtag < 1:22367S8‑M1/168‑2 (MQ=255) ttccggcgggtttatatgcaaccagtaacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCCGG‑CACGTGGCCGAAGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTGTTAACAGTTCAGCAGGACAAGCCTGAACGCAGAAATCAA‑GAGGACAACAttagg > 1:1227S18‑M1/31‑198 (MQ=255) ttATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGGGCATGTTGCTGTTGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAACAGGACAATCCTGAACGCAGAAATCAAAGAGGACAACATTATGGGTAttttt < 1:25272S13/200‑1 (MQ=255) atgaaaccagtaacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCCGG‑CACGTGGCCGAAGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTGTTAACAGTTCAGCAGGACAAGCCTGAACGCAGAAatcaa‑gaggacaacattaggccaataggcggagtg < 1:10635S8‑M1/185‑18 (MQ=255) gaaacgagtaacgTGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCCGG‑CACGTGGCCGAAGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTGTTAACAGTTCAGCAGGACAAGCCTGAACGCAGaaatcaa‑gaggacaacattaggccaaataggccgtaagg > 1:20877S5‑M1/14‑181 (MQ=255) tt‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGTTGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCAA‑GAGGACAACATTATGGGTATTTTTTCTCGCTTTGCCg > 1:21062S37/1‑200 (MQ=255) | CCGCGCAGTTAAGGGAAATAAACGGCCCTTGCCAACGGGAGGAGAGATAATGCAGGCGGCTGGCAATCAGCTCTTTACCGGTGCCGCGTTCGCCGATGATGAGCACCGGTTTGTCCAGCGGTGCGAGATGCG‑AAACCTGTTCCAGCACTTCGAGA‑AAGC‑TGTTCGCCTCACCAAGTAAATTATCTT‑‑TGTATT‑‑CTGCCATGATGAAATTCGCCACTTGTTAGTGT‑AATTCGCT‑AA‑‑C‑‑‑‑T‑‑‑‑‑‑C‑ATCCTGG‑CATGTTGCTGTTGATT‑‑‑CTTCAATC‑AGA‑TCTTTATAAATCAAAA‑AGATAAAAAATTGGCACGCAAATTGTATTAACAGTTCAGCAGGACAATCCTGAACGCAGAAATCAA‑GAGGACAACATTATGGGTATTTTTTCTCGCTTTGCCG > NC_010473/1455134‑1455523 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 50 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |