| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_010473 | = 1380530 | 0 (0.000) | 14 (0.600) +GGGGATCCGTCGACCTGCAGTTCGAAGTTCCTATTCTCTAGAAAGTATAGGAACTTCGAAGCAGCTCCAGCCTACACA |
13/242 | 1.1 | 58.2% | coding (91/612 nt) | lacA | galactoside O‑acetyltransferase |
| ? | NC_010473 | = 4471165 | 33 (0.860) | intergenic (+109/‑29) | groL/yjeI | chaperonin GroEL/DUF4156 domain‑containing protein | |||||
CCGTGTAGTCATCGACAATGGTTAAATTGAAATTTGCATAAAAATTGCGGCCTATATGGATGTTGGAACCGTAAGAGAAATAGACAGGCGGTTCTA‑CCC‑AGGCGTTTTCCCCT‑ACCGTGGCAAACATTTCTTTAATCAGGCTTTCTCTTTTTTCAACTTCTGATGGATGCGAGTGATTAAACTCATACATTAACGTTTTCCCACGAAGTCTTTTTTCCGGTAAGCCTTCGCACATATCGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAA > NC_010473/1380335‑1380722 | ccGTGTAGTCATCGACAATGGTTAAATTGAAATTTGCATAAAAATTGCGGCCTATATGGATGTTGGAACCGTAAGAGAAATAGACAGGCGGTTCTA‑CCC‑AGGCGTTTTCCCCT‑ACCGTGGCAAACATTTCTTTAATCAGGCTTTCTCTTTTTTCAACTTCTGATGGATGCGAGTGATTAAACTCATACATTAACGTgggg > 1:19300S46‑M1/1‑196 (MQ=255) ctgtgttattacaatggttaaATTGAAATTTGCATAAAAATTGCGGCCTATATGGATGTTGGAACCGTAAGAGAAATAGACAGGCGGTTCTA‑CCC‑AGGTGTTTTCCCCT‑ACCGTGGCAAACATTTCTTTAATCAGGCTTTCTCTTTTTTCAACTTCTGATGGATGCGAGTGATTAAACTCATAGATTAACGTggcattcg < 1:10240S40‑M1/190‑9 (MQ=255) gTCATCGACAATGGTTAAATTGAAATTTGCATAAAAATTGCGGCCTATATGGATGTTGGAACCGTAAGAGAAATAGACAGGCGGTTCTA‑CCC‑AGGCGTTTTCCCCT‑ACCGTGGCAAACATTTCTTTAATCAGGCTTTCTCTTTTTTCAACTTCTGATGGATGCGAGTGATTAAACTCATACATTAACGTggtatttgtcg < 1:2824S6‑M1/200‑12 (MQ=255) aTGGTTAAATTGAAATTTGCATAAAAATTGCGGCCTATATGGATGTTGGAACCGTAAGAGAAA‑ATAC‑‑G‑GGTTCTA‑CCC‑AGGTGTTTTCCCCTGACCGTGGCAAACATTTCTTTAATCAGGCTTTCTCTTTTTTCAACTTCTGATGGATGCGAGTGATTAAACTCATACATTAACGTgggatctgtcgacctgcagttcga < 1:29231S2‑M1/200‑25 (MQ=255) aTTGAAATTTGCATAAAAATTGCGGCCTATATGGATGTTGGAACCGTAAGAGAAATAGACAGGCGGTTCTA‑CCC‑AGG‑‑‑TTTCCC‑‑‑ACCGTGGCAAACATTTCTTTAATCAGGCTTTCTCTTTTTTCAACTTCTGATGGATGCGAGTGATTAAACTCATACATTAACGTggtattttgtcgacctgcagttcgaagttcctat < 1:6967S22‑M1/200‑35 (MQ=255) aaaTTGCGGCCTATATGGATGTTGGAACCGTAAGAGAAATAGACA‑GCGATTCTG‑CAG‑AGG‑‑‑TTT‑CCCT‑ACCGTGGCAAACATTTCTTTAATCAGGCTTTCTC‑TTTTTCAACTTCTGATGGATGCGAGTGATTAAACTCATACATTAACGTggggatccgtcgacctgcagttcgaagttcctattctctagaaagtatagg > 1:10777S8‑M1/1‑149 (MQ=255) gctgatatggatGTTGGAACCGTAAGAGAAATAGACAGGCGGTTCTA‑‑CC‑A‑‑CGTTTTCCCCT‑ACCGTGGCAAACATTTCTTTAATCAGGCTTTCTCTTTTTTCAACTTCTGATGGATGCGAGTGATTAAACTCATACATTAACGTggggatcgttgacctgcagttcgaagttcctattctctagaaagtataggaacttc < 1:10755S49‑M1/196‑57 (MQ=255) gCCTATATGGATGTTGGAACCGTAAGAGAAATAGACAGGCGGTTCTA‑CCC‑AGGCGTTTTCCCCT‑ACCGTGGCAAACATTTCTTTAATCAGGCTTTCTCTTTTTTCAACTTCTGATGGATGCGAGTGATTAAACTCATACATTAACGTggggatccgtcgacctgcagttcgaagttcctattctctaaaagtataggaac < 1:25727S73‑M1/200‑54 (MQ=255) atatGGATGTTGGAACCGTAAGAGAAATAGACAGGCGGTTCTA‑CCC‑AGGTGTTTTCCCTG‑ACCGTGGCAAACATTTCTTTAATCAGGCTT‑‑TCTTTTTTCAACTTCTGATGGATGCGAGTGATTAAACTCATACATTAACGTggggtatcgtcgacctgcagtttgagttctgattctctagaaaagataggaacttcgaa < 1:27534S38‑M1/200‑60 (MQ=255) atatGGATGTTGGAACCGTAAGAGAAATAGACAGGCGGTTCTA‑CCC‑AGGCGTTTTCCCCT‑ACCGTGGCAAACATTTCTTTAATCAGGCTTTCTCTTTTTTCAACTTCTGATGGATGCGAGTGATTAAACTGATACATTAACGTggggtattttcgtccacctgcagttcgagttctgattctctagaaagtataggaact < 1:19473S24‑M1/200‑58 (MQ=255) gAACCGTAAGAGAAATAGACAGGCGGTTCTA‑CCC‑AGGCGTTTTCCCCT‑ACCGTGGCAAACATTTCTTTAATCAGGCTTTCTCTTTTTTCAACTTCTGATGGATGCGAGTGATTAAACTCATACATTAACGTggggatcgtcgacctgcagtttgaagttcctattctctagaaagtataggaacttcgaagcagctccag < 1:1058S80‑M1/200‑70 (MQ=255) cGTAAGAGAAATAGACAGGCGGTTCTA‑CCC‑AGGCGTTTTCCCCT‑ACCGTGGCAAACATTTCTTTAATCAGGCTTTCTCTTTTTTCAACTTCTGATGGATGCGAGTGATTAAACTCATACATTAACGTggggatctcgttgacctgcagttcgaagttcctattctctagaaagtataggaacttcagctccagcctacac < 1:11242S1‑M1/200‑74 (MQ=255) gTAAGAGAAATAGACAGGCGGTTCTA‑CCC‑AGGCGTTTTCCCCT‑ACCGTGGCAAACATTTCTTTAATCAGGCTTTCTCTTTTTTCAACTTCTGATGGATGCGAGTGATTAAACTCATACATTAACGTggggatcgttctactacagtttgaagcctcccattctagaaagtataggaacttcgaagcagctccagcctaca < 1:1227S37‑M1/200‑75 (MQ=255) tAAGAGAAATAGACAGGCGGTTCTA‑CCC‑AGGGGTTTTCCCCT‑ACCGTGGCAAACATTTCTTTAATCAGGCTTTCTCTTTTTTCAACTTCTGATGGATGCGAGTGATTAAACTGATACATTAACGTggggatccgtccacctgtagttcgaagttcctattctctagaaagtataggaacttcgaagcagctccagcctac < 1:475S33‑M1/200‑76 (MQ=255) gagaAATAGACAGGCGGTTCTA‑CCC‑A‑‑TGTTTTCCCCT‑ACCGTGGCAAACATTTCTTTAATCAGGCTTTCTCTTTTTTCAACTTCTGATGGATGCGAGTGATTAAACTCATACATTAACGTggggatccgtcgacctgcagttcgaagttcctattctctagaaagtataggaacttcgaagcagctccagcctacacagc < 1:19968S17‑M1/200‑81 (MQ=255) aGGCGGTTCTA‑CCC‑A‑GCGTTTTCCCCT‑ACCGTGGCAAACATTTCTTTAATCAGGCTTTCTCTTTTTTCAACTTCTGATGGATGCGAGTGATTAAACTCGTACATTAACGTggggatccgtcgacctgcagttcgaagttcctattctctagaaagtatagggcttccagcagctccagcctacacagccactcgcgtcgt < 1:20877S24‑M1/200‑91 (MQ=255) ggCGGTTCTA‑CCCTCAGCGTTTTCCCCT‑ACCGTGGCAAACATTTCTTTAATCAGGCTTTCTCTTTTTTCAACTTCTGATGGATGCGAGTGATTAAACTCATACATTAACGTggggatccgtctcactaacagtttgaagttcctattctctagaaagtataggactttgaagcagctccagcctacacagccactcgcgt < 1:27158S2‑M1/200‑90 (MQ=255) ggTTCTACCCC‑AGGCGTTTTCCCCT‑ACCGTGGCAAACATTTCTTTAATCAGGCTTTCTCTTTTTTCAACTTCTGATGGATGCGAGTGATTAAACTCATACATTAACGTggggatccgtcgacctgcagtttgaagttcctattctctagaaagtataggaacttcaagcagctccagcctacacagccactcgcgtcgtc < 1:29173S9‑M1/200‑93 (MQ=255) ggTTCTA‑‑CC‑AGGCGTTTTCCCCT‑ACCGTGGCAAACATTTCTTTAATCAGGCTTTCTCTTTTTTCAACTTCTGATGGATGCGAGTGATTAAACTCATACATTAACGTggggatccgtcgacctgcagttcgaagttcctattctctcgaatctggactttgaagcgggctgccagcctacacagccactcgcgtcgtccgt > 1:31093S199‑M1/1‑106 (MQ=255) gTTCTA‑CCC‑AGGCGTTT‑‑CCCT‑ACCGTGGCAAACATTTCTTTAATCAGGCTTTCTCTTTTTTCAACTTCTGATGGATGCGAGTGATTAAACTCATACATTAACATagcgaattcatcgacctgcagttcgaagttcctattctctagaaagtataggaacttcgaagcagctccagcctacacagccactcgcgtcgtccg > 1:19201S48‑M1/1‑104 (MQ=255) ccc‑AGGCGTTTTCCCCT‑ACCGTGGCAAACATTTCTTTAATCAGGCTTTCTCTTTTTTCAACTTCTGATGGATGCGAGTGATTAAACTCATACATTAACGTggggatccgtcgacctgcagttcgaagttcctattctctagaaagtataggaacttcgaagcagctccagcctacacagccactcgcgtcgtccgtgtct > 1:27006S17‑M1/1‑100 (MQ=255) ccccT‑ACCGTGGCAAACATTTCTTTAATCAGGCTTTCTCTTTTTTCAACTTCTGATGGATGCGAGTGATTAAACTCATACATTAACGTggggatccgtcgacctgcagttcgaagttcctattctctagaaagtataggaacttcgaagcagctccagcctacacagccactcgcgtcgtccgtgtctgaatcttactag < 1:31575S1‑M1/200‑113 (MQ=255) ggCAAACATTTCTTTAATCAGGCTTTCTCTTTTTTCAACTTCTGATGGATGCGAGTGATTAAACTCATACATTAACGTgtaatttcgtccacctgcagttcgaagttcctattctctagaaagtataggaacttcgaagcagctccagcctacacagccactcgcgtcgtccgtgtctgaatcttatactagaaagatga < 1:28288S23‑M1/200‑123 (MQ=255) gCTTTCTCTTTTTTCAACTTCTGATGGATGCGAGTGATTAAACTCATACATTAACGTgggaatccgtcgacctgcagttcgaagttcctattctctagaaagtataggaacttcgaagcgactccagcctacacagccactcgcgtcgtccgtgtctgaatcttatactagaaagatgaccaaaagaaaaacccccagac > 1:18573S2‑M1/1‑57 (MQ=255) tctcTTTTTTCAACTTCTGATGGATGCGAGTGATTAAACTCATACATTAACGTggggatccgtcgacctgcagttcgaagttcctattctctagaaagtataggaacttcgaagcagctccagcctacacagccactcgcgtcgtccgtgtctgaatcttatactagaaagatgaccaaaagaaaaacccccagacattt > 1:27182S32‑M1/1‑53 (MQ=255) ttttttCAACTTCTGATGGATGCGAGTGATTAAACTCATACATTAACGTggggatccgtcgacctgcagttcgaagttcctattctctagaaagtataggaacttcgaagcagctccagcctacacagccactcgcgtcgtccgtgtctgaatcttatactagaaagatgaccaaaagaaaaaccccagacatttctgcc > 1:3673S16‑M1/1‑49 (MQ=255) cTGATGGATGCGAGTGATTAAACTCATACATTAACGTggggatccgtcgacctgcagttcgaagttcctattctctagaaagtataggaatcttcgaagcagctccagcctacacagccactcgcgtcgtccgtgtctgaatcttatactagaaagatgaccaaaagaaaaacccccagacatttctgcccgggggtttg < 1:693S35‑M1/200‑164 (MQ=255) aTTAACGTggggatccgtcgacctgcagttcgaagttcctattctctagaaagtataggaacttcgaagcagctccagcctacacagccactcgcgtcgtccgtgtctgaatcttatactagaaagatgaccaaaagaaaaacccccagacatttctgcccgggggtttgtttatttctgcgaggtgcagggcaattaca > 1:6568S2‑M1/1‑8 (MQ=255) | CCGTGTAGTCATCGACAATGGTTAAATTGAAATTTGCATAAAAATTGCGGCCTATATGGATGTTGGAACCGTAAGAGAAATAGACAGGCGGTTCTA‑CCC‑AGGCGTTTTCCCCT‑ACCGTGGCAAACATTTCTTTAATCAGGCTTTCTCTTTTTTCAACTTCTGATGGATGCGAGTGATTAAACTCATACATTAACGTTTTCCCACGAAGTCTTTTTTCCGGTAAGCCTTCGCACATATCGGTAAATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAA > NC_010473/1380335‑1380722 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 47 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |