| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_010473 | = 3817675 | NA (NA) | 25 (0.650) | 25/398 | 0.9 | 100% | intergenic (+26/+253) | ECDH10B_RS25725/glyS | IS3‑like element IS150 family transposase/glycine‑‑tRNA ligase subunit beta |
| ? | NC_010473 | = 4028799 | 0 (0.000) | intergenic (+8/‑159) | kup/rbsD | low affinity potassium transporter Kup/D‑ribose pyranase | |||||
TTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAA‑CT‑TTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_010473/3817477‑3817675‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTCTGGCGTTAGATTTCGA‑‑CCTGAGTACCCAGTTCGATAACCCTGTTTGG‑CGGGATTTCAAATTGATCTGGTGCACGCAGCGCATTACGTTGCAGCAGCAAGTACAGCTTGCCGCGCAGACGCAAATACCACGGGCGTTTGCCGAGGATC‑‑‑AACGACTCATGCGACATAAAGAAGGAGGTTTCCATCA < NC_010473/4028799‑4028613 TTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTG‑‑CAA‑CT‑TTTTGGGGTCAGTACAGTC > 1:8518S10/1‑200 GAACCTTAAAGTCGGAGCGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAA‑CT‑TTTTGG‑‑TCA‑TACAGTCTGGC < 1:10649S13/200‑1 CCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAA‑CT‑TTTTGGGGTCAGTACAGTCTGGC > 1:5393S16/1‑200 CGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAA‑CT‑TTTTGGGGTCAGTACAGTCTGGCGTTAGATTT < 1:4923S40/200‑1 GGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGA‑TACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAA‑CT‑TTTTGGGGTCAGTACAGTCTGGCGTTAGATTTCG < 1:21921S4/200‑1 TGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAA‑CT‑TTTTGGGGTCAGTACAGTCTGGCGTTAGATTTCGA‑‑CC < 1:10573S7/200‑1 TTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAA‑CT‑TTTTGGGGTCAGTACAGTCTGGCGTTAGATTTCGA‑‑CCTGA < 1:8734S82/200‑1 GCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAA‑AATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATAT‑GGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAA‑CT‑TTTTGGG‑TCAGTACAGTCTGGCGTTAGATTTCGA‑‑CCTGAGTACCCAGTTCGATAACCCTGTTTGG‑CGGGA > 1:29730S57/1‑200 CTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAA‑CT‑TTTTGGGGTCAGTACAGTCTGGCGTTAGATTTCGA‑‑CCTGAGTACCCAGTTCGATAACCCTGTTTGG‑CGGGATTTCAAATTGAT > 1:4973S14/1‑200 ACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAA‑CT‑TTTTGGGGTCAGTACAGTCTGGCGTTAGATTTCGA‑‑CCTGAGTACCCAGTTCGATAACCCTGTTTGG‑CGGGATTTCAAATTGATCTGGT > 1:15609S22/1‑200 CGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAAACTCTTTCGGGGTCAGTACAGTCTGGCGTTAGATTTCGA‑‑CCTGAGTACCCAGTTCGATAACCCTGTTTGG‑CGGGATTTCAAATTGATCTGG < 1:2970S53/200‑1 ATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAA‑CT‑TTTTGGGGTCAGTACAGTCTGGCGTTAGATTTCGA‑‑CCTGAGTACCCAGTTCGATAACCCTGTTTGG‑CGGGATTTCAAATTGATCTGGTGCACGCAGCGCATT < 1:17391S8/200‑1 CTACAACAGCAGAAGAATTAGCC‑‑‑AGCCGAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAA‑CT‑TTTTGGGGTCAGTACAGTCTGGCGTTAGATTTCGA‑‑CCTGAGTACCCAGTTCGATAACCCTGTTTGG‑CGGGATTTCAAATTGATCTGGTGCACGCAGCGCATTACGTTG < 1:5126S6/200‑1 AGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAA‑CT‑TTTTGGGGTCAGTACAGTCTGGCGTTAGATTTCGA‑‑CCTGAGTACCCAGTTCGATAACCCTGTTTGG‑CGGGATT‑CAAATTGATCTGGTGCACGCAGCGCATTACGTTGCAGCAGCAAGT > 1:24600S48/1‑200 AATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAA‑CT‑TTTTGGGGTCAGTACAGTCTGGCGTTAGATTTCGA‑‑CCTGAGTACCCAGTTCGATAACCCTGTTTGG‑CGGGATTTCAAATTGATCTGGTGCACGCAGCGCATTACGTTGCAGCAGCAAGTA > 1:1591S89/1‑200 AGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAA‑CT‑TTTTGGGGTCAGTACAGTCTGGCGTTAGATTTCGA‑‑CCTGAGTACCCAGTTCGATAACCCTGTTTGG‑CGGGATTTCAAATTGATCTGGTGCACGCAGCGCATTACGTTGCAGCAGCAAGTACAGC > 1:5322S32/1‑200 ATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAA‑CT‑TTTTGGGGTCAGTACAGTCTGGCGTTAAATTTCGAACCCTGAGTACCCAGTTCGATAACCCTGTTTGG‑CGGGATTTCAAATTGATCTGGTGCACGCAGCGCATTACGTTGCAGCAGCAAGTACAGCTTGCCG < 1:6438S2/200‑1 AAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAA‑CT‑TTTTGGGGTCAGTACAGTCTGGCGTTAGATTTCGA‑‑CCTGAGTACCCAGTTCGATAACCCTGTTTGG‑CGGGATTTCAAATTGATCTGGTGCACGCAGCGCATTACGTTGCAGCAGCAAGTACAGCTTGCCGCGCAGA > 1:10020S28/1‑200 GTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAA‑CT‑TTTTGGGGTCAGTACAGTCTGGCGTTAGATTTCGA‑‑CCTGAGTACCCAGTTCGATAACCCTGTTTGG‑CGGGATTTCAAATTGATCTGGTGCACGCAGCGCATTACGTTGCAGCAGCAAGTACAGCTTGCCGCGCAGACGCA < 1:23916S36/200‑1 gcaAATCAGACTGATATGCCTCGTGTTTAACTGTCCAA‑CT‑TTTTGGGGTCAGTACAGTCTGGCGTTAGATTTCGA‑‑CCTGAGTACCCAGTTCGATAACCCTGTTTGG‑CGGGATTTCAAATTGATCTGGTGCACGCAGCGCATTACGTTGCAGCAGCAAGTACAGCTTGCCGCGCAGACGCAAATACCACGGGCGTTTGCCG < 1:22622S14/197‑1 TGCCTCGTGTTTAACTGTCCAA‑CT‑TTTTGGGGTCAGTACAGTCTGGCGTTAGATTTCTA‑‑CCTGAGTACCCAGTTCGATAACCCTGTTTGGGCGGGATTTCAAATTGATCTGGTGCACGCAGCGCATTACGTTGCAGCAGCAAGTACAGCTTGCCGCGCAGATGCAAATACCACGGGCGTTTGCCGAGGATC‑‑‑AACGACTCA < 1:27023S2/200‑1 TCGTGTTTAACTGTCCAA‑CT‑TTTTGGGGTCAGTACAGTCTGGCGTTAGATTTCGA‑‑CCTGAGTACCCAGTTCGATAACCCTGTTTGG‑CGGGATTTCAAATTGATCTGGTGCACGCAGCGCATTACGTTGCGGC‑GCAA‑‑CCA‑CTTGCCGCGCAGACGCAAATACCACGGGCGTTTGCC‑A‑‑ATA‑‑‑AACAGCTCATGCGACATAAAG > 1:15008S9/1‑200 cTTTTTGGGTCAGTACAGTCTGGCGTTAGATTTCGA‑‑CCTGAGTACCCAGTTCGATAACCCTGTTTGG‑CGGGATTTCAAATTGATCTGGTGCACGCAGCGCATTACGTTGCAGCAGCAAGTACAGCTTGCCGCGCAGACGCAAATACCACGGGCGTTTGCCGAGGATCTGGAACGACTCATGCGACATAAAGAAGGAGGTT < 1:3820S33/199‑1 TTTTGGGGTCAGTACAGTCTGGCGTTAGATTTCGA‑‑CCTGAGTACCCAGTTCGATAACCCTGTTTGG‑CGGGATTTCAAATTGATCTGGTGCACGCAGCGCATTACGTTGCAGCAGCAAGTACAGCTTGCCGCGCAGACGCAAATACCACGGGCGTTTGCCGAGGATC‑‑‑AACGACTAATACAACATGAAGAAGtccattaatc > 1:5282S75/1‑190 TTGGGGTCAGTACAGTCTGGCGT‑AGATTTCGA‑‑CCTGAGTACCCAGTTCGATAACCCTGTTTGG‑CGGGATTTCAAATTGATCTGGTGCACGCAGCGCATTACGTTGCAGCAGCAAGTACAGCTTGCCGCGCAGACGCAAATACCACGGGCGTTTGCCGAGGATC‑‑‑AACGACTCATGCGACATAAAGAAGGAGGTTTCCATCA > 1:7268S28/1‑200 TTGGAACCTTAAAGTCGGAGTGTTTTTATCTTGATGAGTTCAGTAATATAAGCGAACTGAAGGATGCTGTTACGGAATATATTGAATACTACAACAGCAGAAGAATTAGCCTGAAATTAAAAGGTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAA‑CT‑TTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_010473/3817477‑3817675‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTCTGGCGTTAGATTTCGA‑‑CCTGAGTACCCAGTTCGATAACCCTGTTTGG‑CGGGATTTCAAATTGATCTGGTGCACGCAGCGCATTACGTTGCAGCAGCAAGTACAGCTTGCCGCGCAGACGCAAATACCACGGGCGTTTGCCGAGGATC‑‑‑AACGACTCATGCGACATAAAGAAGGAGGTTTCCATCA < NC_010473/4028799‑4028613 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 47 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |