Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_010473276,9600CT68.8% 87.7 / 73.3 80E130K (GAG→AAG) paoAaldehyde dehydrogenase iron‑sulfur subunit PaoA
Reads supporting (aligned to +/- strand):  ref base C (14/10);  new base T (32/21);  total (48/32)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.10e-01
Rejected as consensus: Frequency below/above cutoff threshold.

GTTGTTTCTGGAGCGGAAACCAAATCGACCGTGACGTGACTGGGAATGCCGTCCTGAATCTCTTTTAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTCGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTCAGTGTC  >  NC_010473/276764‑277159
                                                                                                                                                                                                             |                                                                                                                                                                                                            
gttgttTCTGGAGCGGAAACCAAATCGACCGTGACGTGACTGGGAATGCCGTCCTGAATCTCTTTTAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGc                                                                                                                                                                                                           <  1:22275S11/200‑1 (MQ=255)
  tgttTCTGGAGCGGAAACCAAATCGACCGTGACGTGACTGGGAATGCCGTCCTGAATCTCTTTTAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGccc                                                                                                                                                                                                         <  1:2147S24/200‑1 (MQ=255)
    tttCTGGAGCGGAAACCAAATCGACCGTGACGTGACTGGGAATGCCGTCCTGAATCTCTTTTAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGccccc                                                                                                                                                                                                       >  1:2014S3/1‑200 (MQ=255)
    tttCTGGAGCGGAAACCAAATCGACCGTGACGTGACTGGGAATGCCGTCCTGAATCTCTTTTAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑CGTGGTGA‑‑TCTCGGccccc                                                                                                                                                                                                       >  1:1140S82/1‑200 (MQ=255)
       cTGGAGCGGAAACCAAATCGACCGTGACGTGACTGGGAATGCCGTCCTGAATCTCTTTTAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGa                                                                                                                                                                                                    >  1:15567S13/1‑200 (MQ=255)
        tGGAGCGGAAACCAAATCGACCGTGACGTGACTGGGAATGCCGTCCTGAATCTCTTTTAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGAt                                                                                                                                                                                                   >  1:28955S47/1‑200 (MQ=255)
             cGGAAACCAAATCGACCGTGACGTGACTGGGAATGCCGTCCTGAATCTCTTTTAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCTAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATg                                                                                                                                                                                              <  1:28454S19/200‑1 (MQ=255)
                gcatcAAATCGACCGTGACGTGACTGGGAATGCCGTCCTGAATCTCTTTTAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTCATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACt                                                                                                                                                                                           >  1:5520S28/5‑200 (MQ=255)
                          gACCGTGACGTGACTGGGAATGCCGTCCTGAATCTCTTTT‑‑CACCGTTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTcagg                                                                                                                                                                           >  1:23289S7/1‑200 (MQ=255)
                                   gtgacTGGGAATGCCGTCCTGAATCTCTTTTAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCAt                                                                                                                                                                    <  1:27198S112/200‑1 (MQ=255)
                                   gtgacTGGGAATGCCGTCCTGAATCTCTTTTAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGCCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCAt                                                                                                                                                                    <  1:17931S11/200‑1 (MQ=255)
                                   gtgacTGGGAATGCCGTCCTGAATCTCTTTTAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTCGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCAt                                                                                                                                                                    >  1:32259S10/1‑200 (MQ=255)
                                    taacTGGGAATGCCGTCCTGAATCTCTTTTAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTCGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCAtt                                                                                                                                                                   >  1:18877S16/3‑200 (MQ=255)
                                     gacTGGGAATGCCGTCCTGAATCTCTTTTAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTCGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTa                                                                                                                                                                  <  1:18701S12/200‑1 (MQ=255)
                                     gacTGGGAATGCCGTCCTGAATCTCTTTTAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCG‑‑‑TCACGCTTTTAAT‑‑‑GGTGGTGA‑‑TCTGGCCCCCGACGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCt                                                                                                                                                             <  1:25758S22/200‑1 (MQ=255)
                                     gacTGGGAATGCCGTCCTGAATCTCTTTTAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAg                                                                                                                                                                >  1:28086S3/1‑200 (MQ=255)
                                         gggAATGCCGTCCTGAATCTCTTTTAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTCGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGcc                                                                                                                                                              >  1:15265S33/1‑200 (MQ=255)
                                             aatgctgtcTGAATCTCTTTTAGCACCGCGACCATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTCGGCCCCCTGATGCATGACTGGA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGa                                                                                                                                                         <  1:8083S2/192‑1 (MQ=255)
                                              tGCCGTCCTGAATCTCTTTTAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGa                                                                                                                                                         >  1:24861S34/1‑200 (MQ=255)
                                               gCCGTCCTGAATCTCTTTTAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGTGAAAATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGAcc                                                                                                                                                       <  1:7135S41/200‑1 (MQ=255)
                                                ccGTCCTGAATCTCTTTTAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGAcc                                                                                                                                                       <  1:26710S50/200‑1 (MQ=255)
                                                   tCCTGAATCTCTTTTAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGT‑‑‑CGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGAc                                                                                                                                                 >  1:22328S35/1‑200 (MQ=255)
                                                     cTGAATCTCTTTTAGCACCGCTACTGATGAGCAAATTTGCCCGGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTCGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTg                                                                                                                                                   <  1:9137S37/200‑1 (MQ=255)
                                                     cTGAATCTCTTTTAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTCGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTg                                                                                                                                                   <  1:25223S53/200‑1 (MQ=255)
                                                      tGAATCTCTTTTAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGAc                                                                                                                                                 >  1:21770S35/1‑200 (MQ=255)
                                                        aaTCTCTTTTAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTCGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCa                                                                                                                                               >  1:24214S76/1‑200 (MQ=255)
                                                            tctTTTAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTAA‑‑TATTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCAc                                                                                                                                           >  1:20666S18/1‑200 (MQ=255)
                                                                ttAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTCGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACggct                                                                                                                                       >  1:12895S13/1‑198 (MQ=255)
                                                                 tAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTCGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTAc                                                                                                                                      <  1:545S5/200‑1 (MQ=255)
                                                                         cTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTCGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCg                                                                                                                              >  1:21587S33/1‑200 (MQ=255)
                                                                            cTGATGAGCAAATTTGCCCGGAGGTGCAGATGACCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCa                                                                                                                            >  1:19704S4/1‑200 (MQ=255)
                                                                              gatgaGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTCCGTGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGAGACCATTGACCAGCACGGTACAGGCTCCGCACTGt                                                                                                                        >  1:5395S10/1‑200 (MQ=255)
                                                                               atgaGCAAATTTGCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTCGAGTTCTCTGGCAAACCCAGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCg                                                                                                                    >  1:23053S10/1‑200 (MQ=255)
                                                                                  aGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCAAATAGTCACTGTAAA‑‑‑GCGCCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGt                                                                                                                   <  1:3940S1/200‑1 (MQ=255)
                                                                                   gCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑CGTGGTGAAATATTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTcc                                                                                                                      >  1:2246S19/1‑200 (MQ=255)
                                                                                    cAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTg                                                                                                                  <  1:20675S21/200‑1 (MQ=255)
                                                                                     caaTTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGa                                                                                                                 >  1:26333S3/2‑200 (MQ=255)
                                                                                           gCCCGGAGGTGCGGTCGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTCCCGTGATCGcgaa                                                                                                          >  1:6190S23/1‑197 (MQ=255)
                                                                                                       cAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGt                                                                                                <  1:7025S17/200‑1 (MQ=255)
                                                                                                       cAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTCGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGt                                                                                                >  1:1422S10/1‑200 (MQ=255)
                                                                                                         gTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTAc                                                                                              <  1:23044S55/200‑1 (MQ=255)
                                                                                                             gCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTCGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTGGTACCGAt                                                                                          <  1:7961S10/200‑1 (MQ=255)
                                                                                                                gCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTCGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCGACGTTTCTGGTACCGATCaa                                                                                       >  1:26696S4/1‑200 (MQ=255)
                                                                                                                   cTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAAt                                                                                     >  1:23973S1/1‑200 (MQ=255)
                                                                                                                   cTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTCGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCT‑‑GATGATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGc                                                                                   <  1:11882S83/200‑1 (MQ=255)
                                                                                                                     ggAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGc                                                                                   >  1:16461S11/1‑200 (MQ=255)
                                                                                                                       aaGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAg                                                                                 <  1:21916S28/200‑1 (MQ=255)
                                                                                                                         gCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGAt                                                                               >  1:20096S12/1‑200 (MQ=255)
                                                                                                                         gCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTCGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGAt                                                                               >  1:12526S16/1‑200 (MQ=255)
                                                                                                                          ccATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTCGTACGGATCAAATGCAGAtt                                                                              >  1:13482S29/1‑200 (MQ=255)
                                                                                                                            atcatGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCCAGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGAtttt                                                                            >  1:30564S4/1‑200 (MQ=255)
                                                                                                                                   ttGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCaa                                                                     >  1:2427S42/1‑200 (MQ=255)
                                                                                                                                    tGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCaaa                                                                    >  1:27256S19/1‑200 (MQ=255)
                                                                                                                                         aaGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAgtgt                                                                >  1:31329S7/1‑200 (MQ=255)
                                                                                                                                         aaGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCTCCATCGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAAGGCAGATTTTCACGCAAAGTGTcc                                                              <  1:1680S30/200‑1 (MQ=255)
                                                                                                                                           ggCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCACAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCa                                                             >  1:10648S4/1‑200 (MQ=255)
                                                                                                                                                ccTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTCGGCCCCCTGAATAGTGACTTTAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGc                                                        >  1:13997S9/1‑200 (MQ=255)
                                                                                                                                                 cTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TTTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCg                                                       <  1:11622S222/200‑1 (MQ=255)
                                                                                                                                                   gCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTg                                                     <  1:28082S22/200‑1 (MQ=255)
                                                                                                                                                    cATGGGGTGAAGATTATCCGGCGGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTCGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTg                                                     <  1:21752S28/200‑1 (MQ=255)
                                                                                                                                                     aTGGGGTGAAAATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGt                                                   <  1:3223S87/200‑1 (MQ=255)
                                                                                                                                                     aTGGGGTAAAGATATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTCGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCGACCTTTATTGGTACCAATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGtt                                                  >  1:17897S1/1‑200 (MQ=255)
                                                                                                                                                      tGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAAAAAGCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTCTGGGTCTCATTAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGt                                                   <  1:16124S4/200‑1 (MQ=255)
                                                                                                                                                       ggggTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTc                                                 >  1:24863S24/1‑200 (MQ=255)
                                                                                                                                                           tGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGt                                             >  1:29545S18/1‑200 (MQ=255)
                                                                                                                                                           tGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTCGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGt                                             >  1:21478S39/1‑200 (MQ=255)
                                                                                                                                                              aGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATc                                          <  1:6047S27/200‑1 (MQ=255)
                                                                                                                                                                aTTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCa                                        >  1:31567S13/1‑200 (MQ=255)
                                                                                                                                                                 ttATCTGGCGACCCAGGCCTTCAATATCGGTGGTAA‑‑TACTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTCATTAGGGTATcc                                         >  1:24128S19/1‑200 (MQ=255)
                                                                                                                                                                  tATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTCGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCAcc                                      >  1:1516S3/1‑200 (MQ=255)
                                                                                                                                                                   aTCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCggtatttctacc                                     <  1:3623S137/200‑11 (MQ=255)
                                                                                                                                                                   aTCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTCGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTcagatcgacctca                                     <  1:28544S10/200‑13 (MQ=255)
                                                                                                                                                                    tCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTc                                    >  1:19391S1/1‑200 (MQ=255)
                                                                                                                                                                    tCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTCGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTc                                    <  1:31973S2/200‑1 (MQ=255)
                                                                                                                                                                        gCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAgc                                >  1:15056S4/1‑200 (MQ=255)
                                                                                                                                                                         cGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTCGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAgct                               >  1:13420S25/1‑200 (MQ=255)
                                                                                                                                                                                 aGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTCTGGAACGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGtttt                     <  1:6201S8/200‑1 (MQ=255)
                                                                                                                                                                                      ttCAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCGCTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGc                   >  1:22010S50/1‑200 (MQ=255)
                                                                                                                                                                                        cAAT‑‑‑GGTGGTGA‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTGCGGTATCCACCTCAAGCTGCTCGGTTTTGCCg                 <  1:25067S24/200‑1 (MQ=255)
                                                                                                                                                                                                      a‑‑TCTTGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTCAg      >  1:22960S37/1‑200 (MQ=255)
                                                                                                                                                                                                            tcGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCATGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCGGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTCAGTGTc  >  1:24320S34/1‑200 (MQ=255)
                                                                                                                                                                                                             |                                                                                                                                                                                                            
GTTGTTTCTGGAGCGGAAACCAAATCGACCGTGACGTGACTGGGAATGCCGTCCTGAATCTCTTTTAGCACCGCTACTGATGAGCAAATTTGCCCGGAGGTGCAGTAGCCGCACTGGAAGCCATCATGCTTGATAAAGGCCGCCTGCATGGGGTGAAGATTATCTGGCGAACCCAGGCCTTCAAT‑‑‑GGTGGTGA‑‑TCTCGGCCCCCTGATGCATGACTGCAA‑‑‑GCGTCAGGCAGGCATTAAGCCTGCGACCATTGACCAGCACGGTACAGGCTCCGCACTGTCCGTGATCGCAACCTTTCTTGGTACCGATCAAATGCAGATTTTCACGCAAAGTGTCCAGTAGCGTGGTTCGGGTATCCACCTCAAGCTGCTCGGTTTTGCCGTTCACCTTCAGTGTC  >  NC_010473/276764‑277159

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 50 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: