Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_010473	3,917,725	Δ22 bp	coding (19‑40/276 nt)	rpoZ →	DNA‑directed RNA polymerase subunit omega

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_010473	3917725	3917746	22	46 [0]	[0] 46	rpoZ	DNA‑directed RNA polymerase subunit omega

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_010473	= 3917724	0 (0.000)	46 (1.200)	41/398	0.1	100%	coding (18/276 nt)	rpoZ	DNA‑directed RNA polymerase subunit omega
	?	NC_010473	3917747 =	0 (0.000)					coding (41/276 nt)	rpoZ	DNA‑directed RNA polymerase subunit omega

TTGTGAATGATGACTTCGATACCGCGTTGACCGATTTGAAGACCATTATTCGCGCC‑‑GAACGTCTGCGCATGA‑GCCGCC‑AAAAGCAGCGTCATGACGCTTTAATCAGCAAATTGTT‑GGCAGACTGAACCT‑GA‑TTTCAGTATCATGCCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑TGGCACGCGTAACTGT‑TCAGGACGCTGTAGAGAAAATTGGTAACCGTTTTGACCTGGTACTGGTCGCCGCGCGTCGCGCTCGTCAGATGCAGGTAGGCGGAAAGGATCCGCTGGTACCGGAAGAAAACGATAAAACCACTGTAATCGCGCTGCGCGAAATCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAG  >  NC_010473/3917528‑3917916                                                                                                                                                                                                                 |                                                                                                                                                                                                 ttGTGAATGATGACTTCGATACCGCGTTGACCGATTTGAAGACCATTATTCGCGCC‑‑GAACGTCTGCGCATGA‑GCCGCC‑AAAAGCAGCGTCATGACGCTTTAATCAGCAAATCGT‑‑‑‑CAGACTGAACCT‑GA‑TTTCAGTATCATGCCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAG‑A‑AGGCACGCGTAACTGT‑Tgtaaccg                                                                                                                                                                                           <  1:20294S10‑M1/200‑8 (MQ=255)   gtgAATGATGACTTCGATACCGCGTTGACCGATTTGAAGACCATTATTCGCGCC‑‑GAACGTCTGCGCATGA‑GCCGCC‑AAAAGCAGCGTCATGACGCTTTAATCAGCAAATTGTT‑GGCAGACTGAACCT‑GA‑TTTCAGTATCATGCCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaac                                                                                                                                                                                             <  1:21512S47‑M1/200‑6 (MQ=255)            gaCTTCGATACCGCGTTGACCGATTTGAAGACCATTATTCGCGCC‑‑GAACGTCTGCGCATGA‑GCCGCC‑AAAAGCAGCGTCATGACGCTTTAATCAGCAAATTGTT‑GGCAGACTGAACCT‑GA‑TTTCAGTATCATGCCCAGTCATTTCTTCACCTGTGGCAG‑‑CTTTTT‑AGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgac                                                                                                                                                                                    <  1:6225S31‑M1/200‑15 (MQ=255)             aCTTCGATACCGCGTTGACCGATTTGAAGACCATTATTCGCGCC‑‑GAACGTCTGCGCATGA‑GCCGCC‑AAAAGCAGCGTCATGACGCTTTAATCAGCAAATTGTT‑GGCAGACTGAACCT‑GA‑TTTCAGTATCATGCCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacc                                                                                                                                                                                   >  1:17741S19‑M1/1‑185 (MQ=255)             aCTTCGATACCGCGTTGACCGATTTGAAGACCATTATTCGCGCC‑‑GAACGTCTGCGCATGA‑GCCGCC‑AAAAGCAGCGTCATGACGCTTTAATCAGCAAATTGTT‑‑GCAGAC‑CAACCT‑GA‑TTTCAGTATCATGCCCAGTCATTTCTTCACCTGT‑G‑AG‑‑CTTTTTAAAGA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctgg                                                                                                                                                                                <  1:26758S8‑M1/200‑19 (MQ=255)             aCTTCGATACCGCGTTGACCGATTTGAAGACCATTATTCGCGCC‑‑AAACGTCTGCGCATGA‑GCCGCC‑AAAAGCAGCGTCATGACGCTTTAATCAGCAAATTGTT‑GGCAGACTGAACCT‑GA‑TTTCAGTATCATGCCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAG‑A‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacct                                                                                                                                                                                  <  1:21014S34‑M1/200‑17 (MQ=255)               ttCGATACCGCGTTGACCGATTTGAAGACCA‑TATTCGCGCC‑‑GAACGTCTGCGCATGA‑GCCGCC‑AAAAGCAGCGTCATGACGCTTTAATCAGCAAATTGTT‑GGCAGACTGAACCT‑GA‑TTTCAGTATCATGCCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctgg                                                                                                                                                                                >  1:11546S28‑M1/1‑182 (MQ=255)                     aCCGCGTTGACCGATTTGAAGACCATTATTCGCGCC‑‑GAACGTCTGCGCATGA‑GCCGCC‑AAAAGCAGCGTCATGACGCTTTAATCAGCAAATTGTT‑GGCAGACTGAACCT‑GA‑TTTCAGTATCATGCCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactg                                                                                                                                                                           >  1:8311S2‑M1/1‑177 (MQ=255)                          gTTGACCGATTTGAAGACCATTATTCGCGCC‑‑GAACGTCTGCGCATGA‑GCCGCC‑AAAAGCAGCGTCATGACGCTTTAATCAGCAAATTGTT‑GGCAGACTGAACCT‑GA‑TTTCAGTATCATGCCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgc                                                                                                                                                                      >  1:20886S43‑M1/1‑172 (MQ=255)                                    ttGAAGACCATTATTCGCGCC‑‑GAACGTCTGCGCATGA‑GCCGCC‑AAAAGCAGCGTCATGACGCTTTAATCAGCAAATTGTT‑GGCAGACTGAACCT‑GATTTTCAGTATCATGCCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcg                                                                                                                                                             >  1:3346S21‑M1/1‑163 (MQ=255)                                     tGAAGACCATTATTCGCGCC‑‑GAACGTCTGCGCATGA‑GCCGCC‑AAAAGCAGCGTCATGACGCTTTAATCAGCAAATTGTT‑GGCAGACTGAACCT‑GA‑TTTCAGTATCATGCCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcg                                                                                                                                                           <  1:22155S134‑M1/200‑40 (MQ=255)                                      gAAGACCATTATTCGCGCC‑‑GAACGTCTGCGCATGA‑GCCGCC‑AAAAGCAGCGTCATGACGCTTTAATCAGCAAATTGTT‑GGCAGACTGAACCT‑GA‑TTTCAGTATCATGCCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcgc                                                                                                                                                          >  1:23860S3‑M1/1‑160 (MQ=255)                                          aCCATTATTCGCGCCCTGAATGTCTGCGCATGA‑GCCGCC‑‑‑AAGCAGCGTCATGACGCTTTAATCAGCAAATTGTT‑GGCAGACTGAACCT‑GA‑TTTCAGTATCATGCCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcgctcgt                                                                                                                                                      <  1:7042S7‑M1/200‑45 (MQ=255)                                           ccATTATTCGCGCC‑‑GAACGTCTGCGCATGA‑GCCGCC‑AAAAGCAGCGTCATGACGCTTTAATCAGCAAATTGTT‑GGCAGACTGAACCT‑GA‑TTTCAGTATCATGCCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGTCTgaaccgttttgacctggtactggtcgccgcgcgtcgcgctcgtc                                                                                                                                                      <  1:14272S120‑M1/200‑45 (MQ=255)                                                      gcC‑‑GAACGTCTGCGCATGA‑GCCGCC‑AAAAGCAGCGTCATGACGCTTTAATCAGCAAATTGTT‑GGCAGACTGAACCT‑GA‑TTTCAGTATCATGCCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcgctcgtcagatgcaggta                                                                                                                                          <  1:23315S39‑M1/200‑57 (MQ=255)                                                       cc‑‑GAACGTCTGCGCATGA‑GCCGCCAAAAAGCAGCGTCATGACGCTTTAATCAGCAAATTGTTGGGCAGAC‑GAACCT‑GA‑TTTCAGTATCATGCCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAAGA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcgctcgtcagatgcaggta                                                                                                                                          <  1:4102S80‑M1/200‑57 (MQ=255)                                                            aaCGTCTGCGCATGACACCGCC‑AAAAGCAGCGTCATGACGCTTTAATCAGCAAATTGTT‑GGCAGACTGAACCTCAA‑TTTCAGTATCATGCCCAGTCATTTCTTCACCTGTGG‑AGGACTTTTTAAGCA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctcgtacgtgtcgcccgcgcgtcgcgctcgtcagatgcaggt                                                                                                                                          >  1:31676S29‑M1/1‑144 (MQ=255)                                                                 cTGCGCATGA‑GCCGCC‑AAAAGCAGCGTCATGACGCTTTAATCAGCAAATTGTT‑GGCAGACTGAACCT‑GA‑TTTCAGTATCATGCCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaag                                                                                                                                 >  1:6669S2‑M1/1‑135 (MQ=255)                                                                      cATGA‑GCCGCC‑AAAAGCAGCGTCATGACGCTTTAATCAGCAAATTGTT‑GGCAGACTGAACCT‑GA‑TTTCAGTATCATGCCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatcc                                                                                                                            >  1:21798S21‑M1/1‑130 (MQ=255)                                                                                              cATGACGCTTTAATCAGCAAATTGTT‑GGCAGACTGAACCT‑GA‑TTTCAGTATCATGCCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccggaagaaaacgat                                                                                                      >  1:1801S3‑M1/1‑108 (MQ=255)                                                                                                  aCGCTTTAATCAGCAAATTGTT‑GGCAGACTGAACCT‑GA‑TTTCAGTATCATGCCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccggaagaaaacgataaaa                                                                                                  >  1:10173S8‑M1/1‑104 (MQ=255)                                                                                                         aaTCAGCAAATTGTT‑GGCA‑AGTGAACCT‑GA‑TTTCAGTATCATGCCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgctcgcgctcgtagatgcaggtaggcggaaaggatccgctggtaccggaagaaaaacgataaaaccactgt                                                                                          >  1:13448S26‑M1/1‑96 (MQ=255)                                                                                                               cAAATTGTT‑GGCAGACTGAACCT‑GA‑TTTCAGTATCATGCCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccggaagaaaacgataaaaccactgtaatcgc                                                                                     <  1:31676S8‑M1/200‑110 (MQ=255)                                                                                                                  aTTGTT‑GGCAGACTGAACCT‑GA‑TTTCAGTATCATGCCCAGTCATTTCTTCACCTGT‑G‑AGA‑CTGTTT‑AGTAGAGGCGCGCGTAACTCT‑Tgtaaccgtttttgacctggtactggtcgccgcgcgtcacgctggtcagatgcaggtaggcggaaaggatccgctggtaccggaagaaaacgataaaaccaccgtaatcgcgc                                                                                  >  1:20806S23‑M1/1‑88 (MQ=255)                                                                                                                    gcaagttgtagcactgact‑ga‑tttcagtatcatgcCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtacccgtttcgacctggtactggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccggaagaaaacgataaaaccactgtaatcgcgctg                                                                                 <  1:3348S40‑M1/183‑114 (MQ=255)                                                                                                                                 gAACCT‑GA‑TTTCAGTATCATGCCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccggaagaaaacgataaaaccactgtaatcgcgctgcgcgaaatcgaag                                                                    >  1:24084S54‑M1/1‑74 (MQ=255)                                                                                                                                 gAACCT‑GA‑TTTCAGTATCATGCCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccggaagaaaacgataaaaccactgtaatcgcgctgcgcgaaatcgaag                                                                    >  1:6799S14‑M1/1‑74 (MQ=255)                                                                                                                                             tCAGTATCATGCCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccggaagaaaacgataaaaccactgtaatcgcgctgcgcgaaatcgaagaaggtctgat                                                          >  1:19115S4‑M1/1‑64 (MQ=255)                                                                                                                                              cAGTATCATGCCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccggaagaaaacgataaaaccactgtaatcgcgctgcgcgaaatcgaagaaggtctgatc                                                         >  1:21428S6‑M1/1‑63 (MQ=255)                                                                                                                                                gTATCATGCCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccggaagaaaacgataaaaccactgtaatcgcgctgcgcgaaatcgaagaagctctgatcaa                                                       <  1:20276S168‑M1/200‑140 (MQ=255)                                                                                                                                                        cccAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccggaagaaaacgataaaaccactgtaatcgcgctgcgcgaaatcgaagaaggtctgatcaacaaccaga                                               <  1:23917S7‑M1/200‑148 (MQ=255)                                                                                                                                                          cAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccggaagaaaacgataaaaccactgtaatcgcgctgcgcgaaatcgaagaaggtctgatcaacaaccagatc                                             >  1:19942S28‑M1/1‑51 (MQ=255)                                                                                                                                                           aGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccggaagaaaacgataaaaccactgtaatcgcgctgcgcgaaatcgaagaaggtctgatcaacaaccagatcc                                            >  1:21087S7‑M1/1‑50 (MQ=255)                                                                                                                                                            gTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccggaagaaaacgataaaaccactgtaatcgcgctgcgcgaaatcgaagaagttgttgatcaacaaccagatcc                                           >  1:7449S41‑M1/1‑49 (MQ=255)                                                                                                                                                              cATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccggaagaaaacgataaaaccactgtaatcgcgctgcgcgaaatcgaagaaggtctgatcaaacaaccagattcaa                                         <  1:9575S1‑M1/200‑154 (MQ=255)                                                                                                                                                                  tcttcACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccggaagaaaacgataaaaccactgtaatcgcgctgcgcgaaatcgaagaaggtctgatcaacaaccagatcctcgacgt                                     <  1:28695S137‑M1/200‑158 (MQ=255)                                                                                                                                                                      cACCTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccggaagaaaacgataaaaccactgtaatcgcgctgcgcgaaatcgaagaaggtctgatcaacaaccagatcctcgacgttcgc                                 >  1:19032S3‑M1/1‑39 (MQ=255)                                                                                                                                                                         cTGTGG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccggaagaaaacgataaaaccactgtaatcgcgctgcgcgaaatcgaagaaggtctgatcaacaaccagatcctcgacgttcgcgaa                              >  1:31463S56‑M1/1‑36 (MQ=255)                                                                                                                                                                            tgG‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccggaagaaaacgataaaaccactgtaatcgcgctgcgcgaaatcgaagaaggtctgatcaacaaccgaatgttcgacgttcgcgaacgc                           >  1:27784S10‑M1/1‑33 (MQ=255)                                                                                                                                                                             gg‑AG‑‑CTTTTTAAGTA‑AGGCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaaggcaatttcgctggtaccggaagaaaacgataaaaccactgtaatcgcgctgcgcgaaatcgaagaaggtctgatcaacaaccagatcctcgacgttcgcgaa                          >  1:11094S11‑M1/1‑32 (MQ=255)                                                                                                                                                                                                 ggCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccggaagaaaacgataaaaccactgtaatcgcgctgcgcgaaatcgaagaaggtctgatcaacaaccagatcctcgacgttcgcgaacgccaggaacagcaagagca          >  1:30952S204‑M1/1‑16 (MQ=255)                                                                                                                                                                                                 ggCACGCGTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccggaagaaaacgataaaaccactgtaatcgcgctgcgcgaaatcgaagaaggtctgatcaacaaccagatcctcgacgttcgcgaacgccaggaacagcaagagca          <  1:29250S80‑M1/200‑185 (MQ=255)                                                                                                                                                                                                  gCACGCGTAACTGT‑Tgtaaccgttttgacctgggaactggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccggaagaaaacgataaaaccactgtaatcgcgctgcgcgaaatcgaagaaggtctgatcaacaaccagatcctcgacgttcgcgaacgccaggagcagcaggaagc         <  1:17661S2‑M1/200‑186 (MQ=255)                                                                                                                                                                                                       cgTAACTGT‑Tgtaaccgttttgacctggtactggtcgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccggaagaaaacgataaaaccactgtaatcgcgctgcgcgaaatcgaagaaggtctgatcaacaaccagatcctcgacgttcgcgaacgccaggaacagcaagagcaggaagc    >  1:9658S9‑M1/1‑10 (MQ=255)                                                                                                                                                                                                        gTAACTGT‑Tgtaaccgttttgacctggtactggttgctgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccggaagaaaacgataaaaccactgtaatcgcgctgcgcgaaatcgaagaaggtctgatcaacaaccagatcctcgacgttcgcgaacgccaggaacagcaagagcaggaagcc   <  1:1418S175‑M1/200‑192 (MQ=255)                                                                                                                                                                                                         tAACTGT‑Tgtaaccgttttgacctggtactggacgccgcgcgtcgcgctcgtcagatgcaggtaggcggaaaggatccgctggtaccggaagaaaacgataaaaccactgtaatcgcgctgcgcgaaatcgaagaaggtctgatcaacaaccagatcctcgacgttcgcgaacgccaggaacagcaagagcaggaagccg  <  1:11782S11‑M1/200‑193 (MQ=255)                                                                                                                                                                                                                 |                                                                                                                                                                                                 TTGTGAATGATGACTTCGATACCGCGTTGACCGATTTGAAGACCATTATTCGCGCC‑‑GAACGTCTGCGCATGA‑GCCGCC‑AAAAGCAGCGTCATGACGCTTTAATCAGCAAATTGTT‑GGCAGACTGAACCT‑GA‑TTTCAGTATCATGCCCAGTCATTTCTTCACCTGTGG‑AG‑‑CTTTTTAAGTA‑TGGCACGCGTAACTGT‑TCAGGACGCTGTAGAGAAAATTGGTAACCGTTTTGACCTGGTACTGGTCGCCGCGCGTCGCGCTCGTCAGATGCAGGTAGGCGGAAAGGATCCGCTGGTACCGGAAGAAAACGATAAAACCACTGTAATCGCGCTGCGCGAAATCGAAGAAGGTCTGATCAACAACCAGATCCTCGACGTTCGCGAACGCCAG  >  NC_010473/3917528‑3917916

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 49 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑