New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_010473	306751 =	35 (0.910)	37 (0.970)	31/398	0.4	51.4%	intergenic (+101/‑394)	ECDH10B_RS25865/pdeL	protein YahV/DNA‑binding transcriptional activator/c‑di‑GMP phosphodiesterase PdeL
	?	NC_010473	4640589 =	NA (NA)					intergenic (‑1257/+13)	nanC/ECDH10B_RS23035	N‑acetylneuraminic acid outer membrane channel NanC/IS4‑like element ISVsa5 family transposase

TTGTGGCAAATGGAGTTGACTAATAATGTCATATGTGAGACGGCTAGTTGAACGAATATTAAATTTTGCTGAATTTTTT‑ATGTTGATTTTACTTGTTACAGAACATATCACATGATATATAGATAAGATTAGTTGCATTAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGA‑ATGCC‑GCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCTTGTCCCAACCTTGTTTC  >  NC_010473/4640390‑4640791                                                                                                                                                                                                          |                                                                                                                                                                                                                   ttGTGGCAAATGGAGTTGACTAATAATGTCATATGTGAGACGGCTAGTTGAACGAATATTAAATTTTGCTGAATTTTTT‑ATGTTGATTTTACTTGTTACAGAACATATCACATGATATATAGATAAGATTAGTTGCATTAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCAc                                                                                                                                                                                                                    >  1:16209S15/1‑200 (MQ=255)  tgtgGCAAATGGAGTTGACTAATAATGTCATATGTGAGACGGCTAGTTGAACGAATATTAAATTTTGCTGAATTTTTT‑ATGTTGATTTTACTTGTTACAGAACATATCACATGATATATAGATAAGATTAGTTGCATTAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACt                                                                                                                                                                                                                   <  1:31691S4/200‑1 (MQ=255)            ggAGTTGACTAATAATGTCATATGTGAGACGGCTAGTTGAACGAATATTAAATTTTGCTGAATTTTTT‑ATGTTGATTTTACTTGTTACAGAACATATCACATGATATATAGATAAGATTAGTTGCATTAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATccc                                                                                                                                                                                                        <  1:4483S28/200‑1 (MQ=255)            ggAGTTGACTAATAATGTCATATGTGAGACGGCTAGTTGAACGAATATTAAATTTTGCTGAATTTTTT‑ATGTTGATTTTACTTGTTACAGAACATATCACATGATATATAGATAAGATTAGTTGCATTAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGACAG‑Attgc                                                                                                                                                                                                        <  1:8317S53/200‑4 (MQ=255)              aGTTGACTAATAATGTCATATGTGAGACGGCTAGTTGAACGAATATTAAATTTTGCTGAATTTTTT‑ATGTTGATTTTACTTGTTACAGAACATATCACATGATATATAGATAAGATTAGTTGCATTAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATCCCCt                                                                                                                                                                                                      >  1:11373S16/1‑200 (MQ=255)                   aCTAATAATGTCATATGTGAGACGGCTAGTTGAACGAATATTAAATTTTGCTGAATTTTTT‑ATGTTGATTTTACTTGTTACAGAACATATCACATGATATATAGATAAGATTAGTTGCATTAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATCCCCTCATaa                                                                                                                                                                                                 >  1:15632S77/1‑200 (MQ=255)                     taataaTGTCATATGTGAGACGGCTAGTTGAACGAATATTAAATTTTGCTGAATTTTTT‑ATGTTGATTTTACTTGTTACAGAACATATCACATGATATATAGATAAGATTAGTTGCATTAATGATGAGGATGATTTATCATGTTCGGATCCGATTGATAAATATATAAAGGTACATAGCAcgcgacactccctcataatt                                                                                                                                                                                                 <  1:8964S62/200‑20 (MQ=255)                      aataatGTCATATGTGAGACGGCTAGTTGAACGAATATTAAATTTTGCTGAATTTTTT‑ATGTTGATTTTACTTGTTACAGAACATATCACATGATATATAGATAAGATTAGTTGCATTAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATCCCCTCATAAttt                                                                                                                                                                                              <  1:32542S19/200‑1 (MQ=255)                       ataatGTCATATGTGAGACGGCTAGTTGAACGAATATTAAATTTTGCTGAATTTTTTTATGTTGATTTTACTTGTTACAGAACATATCACATGATATATAGATAAGATTAGTTGCATTAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATCCCCTCagaactt                                                                                                                                                                                              <  1:12198S46/200‑7 (MQ=255)                              cATATGTGAGACGGCTAGTTGAACGAATATTAAATTTTGCTGAATTTTTT‑ATGTTGATTTTACTTGTTACAGAACATATCACATGATATATAGATAAGATTAGTTGCATTAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATCGATAAATATATAAAGGTACATAGCACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑g                                                                                                                                                                                   >  1:16114S53/1‑200 (MQ=255)                               atatGTGAGACGGCTAGTTGAACGAATATTAAATTTTGCTGAATTTTTT‑ATGTTGATTTTACTTGTTACAGAACATATCACATGATATATAGATAAGATTAGTTGCATTAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑Gc                                                                                                                                                                                  >  1:15652S31/1‑200 (MQ=255)                                      agaCGGCTAGTTGAACGAATATTAAATTTTGCTGAATTTTTT‑ATGTTGATTTTACTTGTTACAGAACATATCACATGATATATAGATAAGATTAGTTGCATTAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCa                                                                                                                                                                           >  1:21370S2/1‑200 (MQ=255)                                                 tGAACGAATATTAAATTTTGCTGAATTTTTT‑ATGTTGATTTTACTTGTTACAGAACATATCACATGATATATAGATAAGATTAGTTGCATTAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATaa                                                                                                                                                                >  1:12382S17/1‑200 (MQ=40)                                                                ttttGCTGAATTTTTT‑ATGTTGATTTTACTTGTTACAGAACATATCACATGATATATAGATAAGATTAGTTGCATTAATGATGAGGGTTATT‑ATTAGATTCATATC‑GATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑Agg                                                                                                                                               >  1:31689S8/1‑200 (MQ=39)                                                                 tttGCTGAATTTTTT‑ATGTTGATTTTACTTGTTACAGAACATATCACATGATATATAGATAAGATTAGTTGCATTAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑Agg                                                                                                                                               >  1:18810S23/1‑200 (MQ=39)                                                                                      gATTTTACTTGTTACAGAACATATCACATGATATATAGATAAGATTAGTTGCATTAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACGAGTAAGTc                                                                                                                          <  1:22180S36/200‑1 (MQ=38)                                                                                                gTTACAGAACATATCACATGATATATAGATAAGATTAGTTGCATTAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACGAGTAAGTCTTCCCTTGtt                                                                                                                >  1:16657S11/1‑200 (MQ=37)                                                                                                    cAGAACATATCACATGATATATAGATAAGATTAGTTGCATTAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATCACACTGAGAG‑ATCCCTTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AAG‑‑TAGGCCCCACGAGTAAGTCTTCCCTTGTTATtgt                                                                                                           >  1:31596S1/1‑200 (MQ=37)                                                                                                     aGAACATATCACATGATATATAGATAAGATTAGTTGCATTAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATCCCCTCATAATTTCCC‑‑‑AAA‑GCGTAACCATGTGTGAATAAATTTTG‑‑‑‑AGT‑CGGG‑TTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGc                                                                                                      >  1:29767S2/1‑200 (MQ=37)                                                                                                       aaCATATCACATGATATATAGATAAGATTAGTTGCATTAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACGAGTAAGTCTTCCCTTGTTATTgtgt                                                                                                         >  1:10344S22/1‑200 (MQ=37)                                                                                                          atatCACATGATATATAGATAAGATTAGTTGCATTAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAA‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACGAGTAAGTCTTCCCTTGtcctgtgtagcc                                                                                                      >  1:13611S5/1‑189 (MQ=37)                                                                                                           tatCACATGATATATAGATAAGATTAGTTGCATTAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATTCCCTTATAATTTCCCTG‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGc                                                                                                      <  1:19637S1/200‑1 (MQ=37)                                                                                                            atCACATGATATATAGATAAGATTAGTTGCATTAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCa                                                                                                    >  1:29225S8/1‑200 (MQ=37)                                                                                                               acaTGATATATAGATAAGATTAGTTGCATTAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAGTATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTT‑AGCTAGT‑AGGG‑TTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGa‑a                                                                                                <  1:12110S27/200‑1 (MQ=25)                                                                                                                   gATATATAGATAAGATTAGTTGCATTAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGA‑ATGcc                                                                                            <  1:32721S35/200‑1 (MQ=35)                                                                                                                        ataGATAAGATTAGTTGCATTAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGA‑ATGCC‑GCaaa                                                                                      >  1:10081S25/1‑200 (MQ=35)                                                                                                                                       tGCATTAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGA‑ATGCC‑GCAAAACTTCCATGCCTAAg                                                                       <  1:15989S8/200‑1 (MQ=34)                                                                                                                                            tAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGG‑‑‑T‑C‑GCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGA‑ATGCC‑GCAAAACTTCCATGCCTAAGCGAACTGtt                                                              >  1:11766S20/1‑200 (MQ=18)                                                                                                                                                gatgaGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATCCCTTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGA‑ATGCC‑GCAAAACTTCCATGCCTAAGCGAACTGtt                                                              >  1:28562S37/1‑200 (MQ=18)                                                                                                                                                  tgaGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATCCCCTTATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACGAATAA‑TCTTCCCTTGTTATTGTGTAGCCAGAGCTGCC‑‑CAAA‑CTTCCATGCCTAAGCGAACTGTTgaga                                                          <  1:8104S185/200‑1 (MQ=18)                                                                                                                                                  tgaGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGA‑ATGCC‑GCAAAACTTCCATGCCTAAGCGAACTGTTga                                                            >  1:11720S18/1‑200 (MQ=33)                                                                                                                                                       agggtt‑attaCATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGA‑ATGCC‑GCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTa                                                       >  1:1528S1/5‑200 (MQ=17)                                                                                                                                                        ttatt‑attaGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGA‑ATGCC‑GCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTAc                                                      <  1:28377S2/200‑1 (MQ=33)                                                                                                                                                                taGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATCCCCT‑ATAATTTCCC‑CCAAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGA‑ATGCC‑GCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGa                                               <  1:1975S9/200‑1 (MQ=17)                                                                                                                                                                                     agcactcaaacatgctgaGCACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACCCGTAAGTCTTCCCTTGTTATTGTGTAGCCAGA‑ATGCC‑GCAAAACTTCCATGCCTAAGCGAACTGTT‑AGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGa                         >  1:8957S19/18‑200 (MQ=11)                                                                                                                                                                                          aattggaggcaatgCACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGA‑ATGCC‑GCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTg                     >  1:19498S15/14‑200 (MQ=11)                                                                                                                                                                                           attggaggcaatgCACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGA‑ATGCC‑GCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGc                    <  1:19534S5/188‑1 (MQ=11)                                                                                                                                                                                            ttggaggcaatgCACTGAGAG‑ATCCCC‑GTGAATTTCCC‑‑‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGA‑ATGCC‑GCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCTTg                 <  1:22275S20/189‑1 (MQ=11)                                                                                                                                                                                            aaacatgctgaGCACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGA‑ATGCC‑GCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCt                   >  1:16124S47/11‑200 (MQ=11)                                                                                                                                                                                                aggcaatgCACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTCGTTCGGG‑TTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTGGCCGGA‑ATCCCCGCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCTTg                 >  1:28955S38/8‑200 (MQ=11)                                                                                                                                                                                                aggcaatgCACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTCAATAAATTTTGAGCTAGT‑AGGGGTTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGA‑ATGCC‑GCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCTTGt                >  1:22960S27/8‑200 (MQ=11)                                                                                                                                                                                                 ggcaatgCACTGACAG‑ATTCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGA‑ATGCC‑GCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCTTGTcc              <  1:2147S33/194‑1 (MQ=11)                                                                                                                                                                                                   ctgaGCACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGA‑ATGCC‑GCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCTTGTCCCa            >  1:21630S29/4‑200 (MQ=11)                                                                                                                                                                                                    aatgCACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGA‑ATGCC‑GCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTCTTGACTGTGTTAGCCTGGAAGTGCTTGTCCCaa           >  1:15567S4/4‑200 (MQ=11)                                                                                                                                                                                                        cACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGA‑ATGCC‑G‑‑‑AACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCT‑GTCCCAAccctgcgt   <  1:28454S28/200‑7 (MQ=11)                                                                                                                                                                                                         aCTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAAAGCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGA‑ATGCC‑GCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCTTGTCCCAACCtt       <  1:30234S59/200‑1 (MQ=11)                                                                                                                                                                                                         aCTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACGAGTAAGTAT‑‑‑‑TTGTTATTGTGTAGCCAGA‑ATGCC‑GCAAAACTCCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCTTGTCCCAACCTTGTTTc  >  1:16173S33/1‑200 (MQ=11)                                                                                                                                                                                                          |                                                                                                                                                                                                                   TTGTGGCAAATGGAGTTGACTAATAATGTCATATGTGAGACGGCTAGTTGAACGAATATTAAATTTTGCTGAATTTTTT‑ATGTTGATTTTACTTGTTACAGAACATATCACATGATATATAGATAAGATTAGTTGCATTAATGATGAGGGTTATT‑ATTAGATTCGTATCCGATTGATAAATATATAAAGGTACATAGCACTGAGAG‑ATCCCCTCATAATTTCCC‑C‑AAA‑GCGTAACCATGTGTGAATAAATTTTGAGCTAGT‑AGGG‑TTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGA‑ATGCC‑GCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCTTGTCCCAACCTTGTTTC  >  NC_010473/4640390‑4640791

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 48 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.