| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_010473 | = 15603 | NA (NA) | 15 (0.400) | 15/392 | 2.3 | NA | coding (159/1113 nt) | ECDH10B_RS00080 | IS4‑like element IS421 family transposase |
| ? | NC_010473 | 15607 = | NA (NA) | coding (163/1113 nt) | ECDH10B_RS00080 | IS4‑like element IS421 family transposase | |||||
| Rejected: Unknown rejection reason. | |||||||||||
GCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACT‑GGATACTTC‑GGCACG‑TAATGCCGGGG‑CTCTAACCCGCCGCCGC‑GAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTA‑‑CGGCCCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_010473/15422‑15603‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggg‑ATGTC‑ATTACGTGAAGTCACTGCATGGGCTCAGCTCCATGACGTTGCAACATTATCTGACGTGGCTCTCCTGAAGCGGCTGCGGAATGCCGCCGACTGGTTTGGCATACTTGCCGCACAAACACTTGCTGTACGCGCCGCAGTTACGGGTTGTACAAGCGGAAAGAGATTGCGTCTTGTCGATGGAACAGCAATC > NC_010473/15607‑15801 GCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACTCGCAGACTTC‑GGCACG‑TAATGCCGGGG‑CTCTAACCCGCCGCCGC‑GAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTA‑‑CGGCCCCGGGGATGTC‑ATTACGTGAAG < 1:3672S8/200‑1 TGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACT‑GGATACTTCTGGCAGGACAATGCCCGGG‑CTCTAACCCGCCGCCGC‑GAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTA‑‑CGGCCCCGGGGATGTC‑ATTACGTGAAGTC < 1:18004S28/200‑1 TGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACT‑GGATACTTC‑GGCACG‑TAATGCCGGGG‑CTCTAACCCGCCGCCGCTGAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTA‑‑CGGCCCCGGG‑ACGTC‑ATTACGTGAAGTCAC < 1:6677S10/200‑1 GATATGATCTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACT‑GGATACTTC‑GGCACG‑TAATGCCGGGG‑CTCTAACCCGCCGCCGC‑GAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTA‑‑CGGCCCCGGGGATGTC‑ATTACGTGAAGTCACT < 1:318S2/200‑1 ACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACT‑GGATACTTC‑GGCACG‑TAATGCCGGGG‑CTCTAACCCGCCGCCGC‑GAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTA‑‑CGGCCC‑GGG‑ATGTC‑ATTACGTGAAGTCACTGCATGGGCTCAGCTCCATGACGTTGCAA < 1:16821S15/200‑1 GTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACT‑GGATACTTC‑GGCACG‑TAATGCCGGG‑‑CTCTAACCCGCCGCCGC‑GAAATTCGTGATGCTG‑‑ACTCTGCTACGTCTGGGGCTGGCTTA‑‑CGGCCCCGGG‑ATGTC‑ATTACGTGAAGTCACTGCATGGGCTCAGCTCCATGACGTTGCAACATTATCTGACGTGGCTC < 1:23897S23/200‑1 CGAAGAACT‑GGATACTTC‑GGCACG‑TAATGCCGGGG‑CTCTAACCCGCCGCCGC‑GAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTA‑‑CGGCCCCGGGGATGTC‑ATTACGTGAAGTCACTGCATGGGCTCAGCTCCATGACGTTGCAACATTATCTGACGTGGCTCTCCTGAAGCGGCTGCGGAATGCCGCC < 1:20741S9/200‑1 AGAACT‑GGATACTTC‑GGCACG‑TAATGCCGGGGGCT‑TAAC‑‑GCTGCTGC‑GAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTA‑‑CGGCCCCGGG‑ACGTCGATCAC‑TGAAGTCACTGCATGGGCTCAGCTCCATGACGTTGCAACATTATCTGACGTGGCTCTCCTGAAGCGGCTGCGGAATGCCGCCGACTGG < 1:7718S9/200‑1 CCGGGG‑CTCTAACCCGCCGCCGC‑GAAAT‑‑G‑GACGCCG‑GACTCTGCTACGTCTGGGGCTGGCTTA‑‑CGGCCCCGGG‑ACGTC‑ATTACGTGAAGTCACTGCATGGGCTCAGCTCCATGACGTTGCAACATTATCTGACGTGGCTCTCCTGAAGCGGCTGCGGAATGCCGCCGACTGGTTTGGCATACTTGCCGCACAAACACTTG < 1:29188S14/200‑1 TCTAACCCGCCGCCGC‑GAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTA‑‑CGGCCCCGGG‑ATGTC‑ATTACGTGAAGTCACTGCATGGGCTCAGCTCCATGACGTTGCAACATTATCTGACGTGGCTCTCCTGAAGCGGCTGCGGAATGCCGCCGACTGGTTTGGCATACTTGCCGCACAAACACTTGCTG < 1:4825S32/200‑1 CGCCGCCGC‑GAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTA‑‑CGGCCCCGGGGACGTC‑ATTACGTGAAGTCACTGCATGGGCTCAGCTCCATGACGTTGCAACATTAT‑TGACGCGGCTCTCCTGAAGCGGCTGCGGAATGCCGCCGACTGGTTTGGCATACTTGCCGCACAAACACTTGCTGTACGCGC < 1:3327S74/200‑1 AATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTAAACACCGCCGGG‑ATGTC‑ATTACGTGAAGTCACTGCATGGGCTCAGCTCCATGACGTTGCAACATTATCTGACGTGGCTCTCCT‑AAGCGGCTGCGGAATGCCGCCGACTGGTTTGGCATACTTGCCGCACAAACACTTGCTGTACGCGCCGCAGTTACG < 1:27661S44/200‑1 ACTCTGCTACGTCTGGGGCTGGCTTA‑‑CGGCCCCGGG‑ACGTC‑ATTACGTGAAGTCACTGCATGGGCTCAGCTCCATGACGTTGCAACATTATCTGACGTGGCTCTCCTGAAGCGGCTGCGGGATGCCGCCGACTGGTTTGGCATACTTGCCGCACAAACACTTGCTGTACGCGCCGCAGTTACGGGTTGTACAAGCGGAAA < 1:14800S9/200‑1 CTGGCTTA‑‑CGGCCCCGG‑‑ACGTC‑ATTACGTGAAGTCACTGCATGGGCTCAGCTCCATGACGTTGCAACATTATCTGACGTGGCTCTCCTGAAGCGGCTGCGGAATGCCGCCGACTGGTTTGGCATACTTGCCGCACAAACACTTGCTGTACGCGCCGCAGTTACGGGTTGTACAAGCGGAAAGAGATTGCGTCTTGTCGAT < 1:32318S1/200‑1 CCGGG‑ATGTC‑ATTACGTGAAGTCACTGCATGGGCTCAGCTCCATGACGTTGCAACATTATCTGACGTGGCTCTCCTGAAGCGGCTGCGGAATGCCGCCGACTGGTTTGGCAAAACTGCCGCACAAACACTTGCTGTACGCGCCGCAGTTACGGGTTGTACAAGCGGAAAGAGATTGCGTCTTGTCGATGGAACAGCAATC < 1:54S134/200‑1 GCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGATAACTGGTCAGCAATTCTGGCCCATATTGGTAAGCCCGAAGAACT‑GGATACTTC‑GGCACG‑TAATGCCGGGG‑CTCTAACCCGCCGCCGC‑GAAATTCGTGATGCTGCAACTCTGCTACGTCTGGGGCTGGCTTA‑‑CGGCCCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_010473/15422‑15603‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggg‑ATGTC‑ATTACGTGAAGTCACTGCATGGGCTCAGCTCCATGACGTTGCAACATTATCTGACGTGGCTCTCCTGAAGCGGCTGCGGAATGCCGCCGACTGGTTTGGCATACTTGCCGCACAAACACTTGCTGTACGCGCCGCAGTTACGGGTTGTACAAGCGGAAAGAGATTGCGTCTTGTCGATGGAACAGCAATC > NC_010473/15607‑15801 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 47 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |