Integrted Human Practices

Experts’ opinions


Experts’ opinions were crucial to our project to ensure that our research was innovative, scientifically sound, ethically, and socially acceptable. We faced so many hurdles in our project and had so many unanswered questions. With the help of experts, we were able to achieve some aspects of our project. We are grateful for all the advice and support they provided.

Dr Heba Y. Alojail, PhD · Dermatologist

King Faisal University, Al-ahsa, SAU

We consulted Dr Heba Alojail and told her about our project. We wanted to know her stance about using antimicrobial peptides (AMPs) in treating Skin and Soft Tissue infections. She agreed that AMPs are one of the promising alternatives to antibiotics on the basis of their broad scale of activities, and that AMPs lower probability of resistance appearance. She mentioned that more clinical trials need to be performed to confirm their long-term safety, efficacy, and optimal use in medical practice.

We told her of our plan to develop our engineered peptide into a topical cream to avoid negative side effects displayed by other treatment strategies. She agreed that topical therapy can reduce the side effects better than oral and intravenous therapy, however, topical treatment alone may not be sufficient for infections that reach deeper layers of tissue (such as those involving the muscles or the nervous system).

She suggested that we consider preparing to use either hyaluronic acid which can enhance transdermal penetration by moisturizing the skin and briefly breaking tight bonds. She believed that since hyaluronic acid is naturally a wound-healing and biocompatible molecule, it is a good candidate for SSTI treatments. She also suggested other Polymeric Carriers such as : Poly(lactic-co-glycolic acid) , nanoparticles or hydrogels, cell penetrating peptides, Lipid-based Carriers such as Liposomes or solid lipid nanoparticles and Cyclodextrins a cyclic oligosaccharides are capable of binding with AMPs to form complexes that protect the AMP against degradation, while at the same time enhancing its aqueous solubility and permeability through the skin barrier.

She told us that developing an effective treatment against all skin and soft tissue infections is complicated but not impossible. But as many different pathogens can cause SSTIs, such as fungal infections, Streptococcus species, Gram-negative bacteria, and Staphylococcus aureus (MSSA, MRSA). Treatment formulation would be considered more difficult if a drug were active against such a wide range of these species. She further stated that AMPs having a broad spectrum of resistance against bacteria, could encourage resistance if used indiscriminately. This is a serious problem because frequent use may unintentionally encourage the development of resistant strains.

She advised us on importance to Optimize Skin Penetration, Safety and Toxicity, focus on Selectivity by designing our AMPs to target specific pathogenic bacteria without disrupting beneficial microbiota, engage early with regulatory agencies like the SFDA to understand their requirements for new AMP-based treatments. We asked us to put Sustainability and Ethical Considerations in our minds and stay informed about patterns of microbial resistance as the emergence of new bacterial can alter our AMPs.

Dr Tran Van Dinh · Assistant Professor

Department of Information and Computer Science, KFUPM

Dr Van assisted the dry lab team in predicting genes responsible for producing AMPs. However, after thorough research, we found that AMP genes in bacteria are often organized in operons containing not only the AMP genes, but also regulatory genes. Dr Van explained that AMP genes are not always expressed as an operon, he suggested we analyzed the genes we found to confirm this. We were worried that the genes we found may not possess antimicrobial activity. He advised that we look at the structures of similar proteins and infer their functions based on the functions of the similar protein whose functions are already known.

Mr Muhammad Naeem

Weill Medical College of Cornell University New York, USA

With the help of Muhammad Naeem, we were able to find a regulatory gene asfR which controls the biosynthesis of secondary metabolites including antibiotics. Mr. Naeem suggested we co express our predicted genes with asfR as it may influence the production of AMP in our chassis.